RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Fam91a1Q3UVG3 837 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ccdc85aQ5SP85 500 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Insm1Q63ZV0 521 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Defa17Q64016 82 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tmem121Q80XA0 318 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dapk2Q8VDF3 370 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 ArhgdiaQ99PT1 204 aaKnown RBP12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Paqr5Q9DCU0 330 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 NumbQ9QZS3 653 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 A530032D15RikE9Q422 215 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Kng1O08677 661 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 PlaaP27612 794 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Htr4P97288 388 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Prom2Q3UUY6 835 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fam20cQ5MJS3 579 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Polr2eQ80UW8 210 aaKnown RBP12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 4933409G03RikQ8C5U0 320 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 DaglbQ91WC9 669 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mta3Q924K8 591 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gins4Q99LZ3 223 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Trmt11Q9CWH5 460 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Lsm12Q9D0R8 195 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Hs6st1Q9QYK5 411 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Arhgef10Q8C033 1345 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Disp2Q8CIP5 1345 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Zfp831A2ADM8 1628 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gm7086A0A1W2P766 342 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vmn1r2A2AMT6 306 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rdh7O88451 316 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ass1P16460 412 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Psmd7P26516 321 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Clec4fP70194 548 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Oog3Q3UWY1 500 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Chst10Q6PGK7 356 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mapkap1Q8BKH7 522 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Lsm14aQ8K2F8 462 aaKnown RBP12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dtwd1Q9D8U7 304 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Bmp15Q9Z0L4 392 aa12.94□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Olfm1O88998 485 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 HdcP23738 662 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 RxrbP28704 520 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Shmt1P50431 478 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rhox5P52651 210 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Slc16a1P53986 493 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fam47cQ14BE7 430 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 BtrcQ3ULA2 605 aaKnown RBP12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Marveld2Q3UZP0 555 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dna2Q6ZQJ5 1062 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Uts2bQ765I1 113 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mib1Q80SY4 1006 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pnma2Q8BHK0 365 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Abraxas1Q8BPZ8 407 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Syne4Q8CII8 388 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fnbp1lQ8K012 605 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pcdh18Q8VHR0 1134 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Golm1Q91XA2 393 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Wrnip1Q91XU0 660 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Slc12a9Q99MR3 914 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Zmat2Q9CPW7 199 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tmx2Q9D710 295 aaKnown RBP12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Rnft1Q9DCN7 395 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vmn1r3A2AMT7 306 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gm6205E9PZS2 359 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Zfp946F6VWU8 523 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ercc2O08811 760 aaKnown RBP12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Myl4P09541 193 aaKnown RBP12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Wnt3aP27467 352 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ifi47Q61635 420 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Skiv2lQ6NZR5 1244 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gja6Q6S5G4 283 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ints6lQ8BND4 861 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gm6367Q8C6L9 287 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Agbl2Q8CDK2 862 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Trim61Q8JZK6 461 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Vmn1r79Q8R285 306 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Ddx50Q99MJ9 734 aaKnown RBP12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Q9CQC3 228 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 QpctQ9CYK2 362 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tubgcp4Q9D4F8 667 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cdh22Q9WTP5 813 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mrpl40Q9Z2Q5 206 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Veph1A1A535 833 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Klhl4B1AZR0 717 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Golgb1E9PVZ8 3238 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fbrsl1E9Q9T0 1031 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gm8909G3UXE9 396 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 PdgfrbP05622 1098 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mpp1P70290 466 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Hsdl2Q2TPA8 490 aaKnown RBP12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cyp2j13Q3UNV4 503 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Mthfd1lQ3V3R1 977 aaKnown RBP12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 MogQ61885 246 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Fam214aQ69ZK7 1075 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Garem2Q6PAJ3 880 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Cfap206Q6PE87 622 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Tbc1d17Q8BYH7 645 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Dennd1cQ8CFK6 786 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Gstm4Q8R5I6 218 aa12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Exd2Q8VEG4 650 aaKnown RBP12.93□□□□□ -0.34
Clcn3-201ENSMUST00000004430 Pcdhb13Q91Y06 796 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms