RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 FAM72DQ6L9T8 149 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 RWDD4Q6NW29 188 aaKnown RBP15.41■□□□□ 0.06
PHGDH-231ENST00000641939 SCYL2Q6P3W7 929 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 USP30Q70CQ3 517 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 TMC6Q7Z403 805 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 FAM72BQ86X60 149 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 DNAAF5Q86Y56 855 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 SH2D3CQ8N5H7 860 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 DCAF4L2Q8NA75 395 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 GANCQ8TET4 914 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 DNASE2BQ8WZ79 361 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 TBC1D31Q96DN5 1066 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 XPO4Q9C0E2 1151 aaKnown RBP15.41■□□□□ 0.06
PHGDH-231ENST00000641939 SGK2Q9HBY8 427 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 FBXL12Q9NXK8 326 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 SUSD2Q9UGT4 822 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 SLC6A14Q9UN76 642 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 HS3ST2Q9Y278 367 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 LUC7L2Q9Y383 392 aaKnown RBP15.41■□□□□ 0.06
PHGDH-231ENST00000641939 PCDH15Q96QU1 1955 aa15.41■□□□□ 0.06
PHGDH-231ENST00000641939 DCDC2BA2VCK2 349 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 METTL12A8MUP2 240 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 MID1O15344 667 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 CBFA2T2O43439 604 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 LRIG2O94898 1065 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 SEMA4FO95754 770 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 ADH1BP00325 375 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 GYPCP04921 128 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 SERPING1P05155 500 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 SERPINF2P08697 491 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 SRCP12931 536 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 GNSP15586 552 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 RHOQP17081 205 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 MAOBP27338 520 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 SLC8A1P32418 973 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 MAPKAPK2P49137 400 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 AIF1P55008 147 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 OGDHQ02218 1023 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 GNA12Q03113 381 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 NFKBIBQ15653 356 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 EFHC2Q5JST6 749 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 VPS36Q86VN1 386 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 DRC7Q8IY82 874 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 OR7D4Q8NG98 312 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 ZNF653Q96CK0 615 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 TRIM11Q96F44 468 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.4■□□□□ 0.06
PHGDH-231ENST00000641939 MAGEB5Q9BZ81 275 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 ISCUQ9H1K1 167 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 C6orf106Q9H6K1 298 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-231ENST00000641939 TMEM9BQ9NQ34 198 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 CNOT8Q9UFF9 292 aaKnown RBP15.4■□□□□ 0.06
PHGDH-231ENST00000641939 NEU3Q9UQ49 428 aa15.4■□□□□ 0.06
PHGDH-231ENST00000641939 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.4■□□□□ 0.06
PHGDH-231ENST00000641939 A0A1W2PP55 124 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 TMEM191CA6NGB0 347 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 C4orf47A7E2U8 309 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 CBX4O00257 560 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 MT-CO1P00395 513 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 IL1BP01584 269 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 MYBL1P10243 752 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 C5AR1P21730 350 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 PSMA2P25787 234 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 CASP14P31944 242 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 L1CAMP32004 1257 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 PSMD8P48556 350 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 GFPT1Q06210 699 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-231ENST00000641939 DSG4Q86SJ6 1040 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 NLRP14Q86W24 1093 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 ATP11CQ8NB49 1132 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 OR8D1Q8WZ84 308 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 OMDQ99983 421 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 SPON2Q9BUD6 331 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 CAPN10Q9HC96 672 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 ATP13A1Q9HD20 1204 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 TMEM248Q9NWD8 314 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 SERGEFQ9UGK8 458 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 ADAMTS1Q9UHI8 967 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 FZD10Q9ULW2 581 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 SCINQ9Y6U3 715 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 DOCK9Q9BZ29 2069 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 CABIN1Q9Y6J0 2220 aa15.39■□□□□ 0.05
PHGDH-231ENST00000641939 PCNX2A6NKB5 2137 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 K7ERQ8 282 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 CDX4O14627 284 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-231ENST00000641939 ALOX15BO15296 676 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 RNASEH2AO75792 299 aaKnown RBP15.38■□□□□ 0.05
PHGDH-231ENST00000641939 GOT1P17174 413 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 ENGP17813 658 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 GLDCP23378 1020 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 ETFBP38117 255 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 CLCN6P51797 869 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 FOXK2Q01167 660 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 RETSATQ6NUM9 610 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 LINGO4Q6UY18 593 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 Q6ZVU0 165 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 PYROXD2Q8N2H3 581 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 HDDC3Q8N4P3 179 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 FNIP1Q8TF40 1166 aa15.38■□□□□ 0.05
PHGDH-231ENST00000641939 EPAS1Q99814 870 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms