RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CREB1P16220 341 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 EN2P19622 333 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-216ENST00000641375 MGAT1P26572 445 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 OR1E1P30953 314 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 RENBPP51606 427 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 YBEYP58557 167 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-216ENST00000641375 PABPC1LQ4VXU2 614 aaKnown RBP16.77■□□□□ 0.28
PHGDH-216ENST00000641375 DNAAF3Q8N9W5 541 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 USP33Q8TEY7 942 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 RAD9AQ99638 391 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 PLAC1Q9HBJ0 212 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 GLOD4Q9HC38 313 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 CASS4Q9NQ75 786 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 ZNF212Q9UDV6 495 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 ZNF180Q9UJW8 692 aa16.77■□□□□ 0.28
PHGDH-216ENST00000641375 PLXNA4Q9HCM2 1894 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 ALDH1A2O94788 518 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 C1QAP02745 245 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 POLBP06746 335 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.27
PHGDH-216ENST00000641375 GBP2P32456 591 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-216ENST00000641375 SLC18A1P54219 525 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 PPARDQ03181 441 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 SPARCL1Q14515 664 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 POLD3Q15054 466 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-216ENST00000641375 RABGAP1LQ5R372 815 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 TMEM240Q5SV17 173 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 LGSNQ5TDP6 509 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 PRPF39Q86UA1 669 aaKnown RBP16.77■□□□□ 0.27
PHGDH-216ENST00000641375 CTAGE3PQ8IX95 158 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 LGI2Q8N0V4 545 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 OR52K1Q8NGK4 314 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 NSMCE1Q8WV22 266 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 ATXN2LQ8WWM7 1075 aaKnown RBP16.77■□□□□ 0.27
PHGDH-216ENST00000641375 ARNTL2Q8WYA1 636 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 TTC17Q96AE7 1141 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 HMCESQ96FZ2 354 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 RBM22Q9NW64 420 aaKnown RBP eCLIP16.77■□□□□ 0.27
PHGDH-216ENST00000641375 NKIRAS1Q9NYS0 192 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 MOCS1Q9NZB8 636 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 PCDH10Q9P2E7 1040 aa16.77■□□□□ 0.27
PHGDH-216ENST00000641375 SMG5Q9UPR3 1016 aaKnown RBP16.77■□□□□ 0.27
PHGDH-216ENST00000641375 GOLGA6L7A0A1B0GV03 622 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 GMNCA6NCL1 334 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 FOXO6A8MYZ6 492 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 ADH1AP07327 375 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 NPY2RP49146 381 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 CDH17Q12864 832 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 OTOP3Q7RTS5 596 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 TMC7Q7Z402 723 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 CNPY4Q8N129 248 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 PHOSPHO2Q8TCD6 241 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 SP110Q9HB58 689 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 SSU72Q9NP77 194 aaKnown RBP16.76■□□□□ 0.27
PHGDH-216ENST00000641375 SYBUQ9NX95 663 aa16.76■□□□□ 0.27
PHGDH-216ENST00000641375 CXXC1Q9P0U4 656 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-216ENST00000641375 MAGEB16A2A368 324 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 FAM47DPA6NHR8 397 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 FAM159BA6NKW6 160 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 PRPF4O43172 522 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■■■□ 19.9
PHGDH-216ENST00000641375 TGM5O43548 720 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 PIAS1O75925 651 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 STC2O76061 302 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 GEMP55040 296 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 CORO7P57737 925 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 FAM133BQ5BKY9 247 aaKnown RBP16.75■□□□□ 0.27
PHGDH-216ENST00000641375 CCDC149Q6ZUS6 474 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 DENND1CQ8IV53 801 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 HERC6Q8IVU3 1022 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 PPM1NQ8N819 430 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 SP7Q8TDD2 431 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-216ENST00000641375 DYDC1Q8WWB3 177 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 CDKL2Q92772 493 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 OXNAD1Q96HP4 312 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-216ENST00000641375 SGSM3Q96HU1 749 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 IL22Q9GZX6 179 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 RNF38Q9H0F5 515 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 CCDC134Q9H6E4 229 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 PIH1D1Q9NWS0 290 aaKnown RBP16.75■□□□□ 0.27
PHGDH-216ENST00000641375 SLC4A7Q9Y6M7 1214 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 OBSL1O75147 1896 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-216ENST00000641375 C2orf78A6NCI8 922 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 NDUFAB1O14561 156 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 USP12O75317 370 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 KRT37O76014 449 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 CXCL14O95715 111 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 HLA-DQB2P05538 268 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 CORO1AP31146 461 aaKnown RBP16.75■□□□□ 0.27
PHGDH-216ENST00000641375 CRADDP78560 199 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 MARC1Q5VT66 337 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 ZNF449Q6P9G9 518 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 ZNF354CQ86Y25 554 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 MZB1Q8WU39 189 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 ALKBH8Q96BT7 664 aaKnown RBP16.75■□□□□ 0.27
PHGDH-216ENST00000641375 DDX50Q9BQ39 737 aaKnown RBP16.75■□□□□ 0.27
PHGDH-216ENST00000641375 KLF16Q9BXK1 252 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-216ENST00000641375 LZTS1Q9Y250 596 aa16.75■□□□□ 0.27
PHGDH-216ENST00000641375 FAM107AO95990 144 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms