RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 SNX31Q8N9S9 440 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 DDX1Q92499 740 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 SKA1Q96BD8 255 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 MTMR12Q9C0I1 747 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 WDR6Q9NNW5 1121 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 SETD4Q9NVD3 440 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 LGALS13Q9UHV8 139 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 ACTL7BQ9Y614 415 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 DYNC1LI2O43237 492 aaPredicted RBP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 APRTP07741 180 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 CFHP08603 1231 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 ABCG1P45844 678 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 MFAP3P55082 362 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 DAB2P98082 770 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 TNFAIP2Q03169 654 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 GRIK4Q16099 956 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 ANKRD22Q5VYY1 191 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 RHOT1Q8IXI2 618 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 THNSL1Q8IYQ7 743 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 ANKRD36BP1Q96IX9 119 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 NT5C1BQ96P26 610 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 CXorf21Q9HAI6 301 aa12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 CPSF3Q9UKF6 684 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-224ENST00000641259 A0A088AWK7 358 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 DNALI1O14645 258 aaPredicted RBP12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 DAB1O75553 588 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 FMO1Q01740 532 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 TIGD2Q4W5G0 525 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 PPM1LQ5SGD2 360 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 ATF7IP2Q5U623 682 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 SLC9A4Q6AI14 798 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 SCYL2Q6P3W7 929 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 DENND1AQ8TEH3 1009 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 CGRRF1Q99675 332 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 CXCL16Q9H2A7 254 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 GJD2Q9UKL4 321 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 AKT3Q9Y243 479 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 NOX1Q9Y5S8 564 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 MANSC4A6NHS7 340 aaPredicted RBP12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 GPR25O00155 361 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 F7P08709 466 aaPredicted RBP12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 SMIM18P0DKX4 95 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 CYP2C9P11712 490 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 CYP11B1P15538 503 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 GRK2P25098 689 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 EMP3P54852 163 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 CDKL1Q00532 357 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 ZNF484Q5JVG2 852 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 MFSD7Q6UXD7 560 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 BNIPLQ7Z465 357 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 GATAD2AQ86YP4 633 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 ZBTB8OSQ8IWT0 167 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 STN1Q9H668 368 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 ABCB10Q9NRK6 738 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 ACKR2O00590 384 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 CCNT2O60583 730 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 KLHL2O95198 593 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 IGHA2P01877 340 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 CD19P15391 556 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 BEX3Q00994 111 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 NFX1Q12986 1120 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 GEN1Q17RS7 908 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 ZNF423Q2M1K9 1284 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 KCNT2Q6UVM3 1135 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 BRSK2Q8IWQ3 736 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 TNS4Q8IZW8 715 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 STARD8Q92502 1023 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 SCYL1Q96KG9 808 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 HNRNPABQ99729 332 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 CDT1Q9H211 546 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 CDHR5Q9HBB8 845 aa12.08□□□□□ -0.48
RBFOX1-224ENST00000641259 ZSCAN5BA6NJL1 495 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 FSCN2O14926 492 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 TM9SF1O15321 606 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 PARNO95453 639 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 AMHP03971 560 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 HOXC6P09630 235 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 CCDC159P0C7I6 412 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 GFAPP14136 432 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 GMPRP36959 345 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 GSSP48637 474 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 NDST2P52849 883 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 TAS2R40P59535 323 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 FOXD4Q12950 439 aaPredicted RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 KRT72Q14CN4 511 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 KCNJ8Q15842 424 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 ZNF568Q3ZCX4 644 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 FASTKD1Q53R41 847 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 TJAP1Q5JTD0 557 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 DCDC5Q6ZRR9 648 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 CDHR3Q6ZTQ4 885 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 FRMD7Q6ZUT3 714 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 PHTF2Q8N3S3 785 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 JADE3Q92613 823 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 ATP6V1E2Q96A05 226 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 MOCOSQ96EN8 888 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 MAELQ96JY0 434 aaKnown RBP12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 PKP2Q99959 881 aa12.07□□□□□ -0.48
RBFOX1-224ENST00000641259 TLE6Q9H808 572 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms