RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CCNA1P78396 465 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 SEPT6Q14141 434 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 FLOT2Q14254 428 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 LSM12Q3MHD2 195 aaKnown RBP14.88□□□□□ -0.03
SCARB2-221ENST00000640341 ZNF280DQ6N043 979 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 IYDQ6PHW0 289 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 SATL1Q86VE3 508 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 GALNT15Q8N3T1 639 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 ACTRT2Q8TDY3 377 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 WNT8BQ93098 351 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 PLEKHA5Q9HAU0 1116 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 GPAMQ9HCL2 828 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 DNAJC28Q9NX36 388 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 NUDT5Q9UKK9 219 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 SORCS3Q9UPU3 1222 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 PCDHB12Q9Y5F1 795 aa14.88□□□□□ -0.03
SCARB2-221ENST00000640341 SIP14410 1827 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 MEIS3P2A8K0S8 358 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 I6L893 689 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-221ENST00000640341 VAPBO95292 243 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 NPR3P17342 541 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 SMPD1P17405 629 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 NOS2P35228 1153 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 MSLNQ13421 630 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-221ENST00000640341 ART3Q13508 389 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 CCDC153Q494R4 210 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 SPANXN3Q5MJ09 141 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 SEL1L3Q68CR1 1132 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 CWF19L1Q69YN2 538 aaKnown RBP14.87□□□□□ -0.03
SCARB2-221ENST00000640341 PDSS2Q86YH6 399 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 LRRC52Q8N7C0 313 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 NAT9Q9BTE0 207 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 FTHL17Q9BXU8 183 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 GTSE1Q9NYZ3 720 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 DTNAQ9Y4J8 743 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 BPTFQ12830 3046 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 ZNF195O14628 629 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 PIK3R1P27986 724 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 ADRA1BP35368 520 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 LILRA4P59901 499 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 ROR2Q01974 943 aaKnown RBP14.87□□□□□ -0.03
SCARB2-221ENST00000640341 CNGA3Q16281 694 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 GSTA3Q16772 222 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 OTUD1Q5VV17 481 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-221ENST00000640341 GPRIN1Q7Z2K8 1008 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 SPATA24Q86W54 205 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 HSFY1Q96LI6 401 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 LRGUKQ96M69 825 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 NR1H4Q96RI1 486 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-221ENST00000640341 ADA2Q9NZK5 511 aa14.87□□□□□ -0.03
SCARB2-221ENST00000640341 NEMP2A6NFY4 417 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 G3V2L1 256 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 SNUPNO95149 360 aaKnown RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 HNRNPLP14866 589 aaKnown RBP eCLIP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 PTPN1P18031 435 aaKnown RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 THOP1P52888 689 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 MPP1Q00013 466 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 FOLH1Q04609 750 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 BTKQ06187 659 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 PDK3Q15120 406 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 CNPY1Q3B7I2 92 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 LAYNQ6UX15 382 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 NT5DC4Q86YG4 428 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 ZNF560Q96MR9 790 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 NPAS2Q99743 824 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 CENPKQ9BS16 269 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 SUDS3Q9H7L9 328 aaPredicted RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 DDX43Q9NXZ2 648 aaKnown RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 ZDHHC2Q9UIJ5 367 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 ZCWPW2A0A1B0GU75 182 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 CCNT2O60583 730 aaKnown RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 PMPCBO75439 489 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 UQCRBP14927 111 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 XRCC1P18887 633 aaPredicted RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 LIN52Q52LA3 116 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 CLEC20AQ6ZU45 233 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 TMC7Q7Z402 723 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 LINC01465Q8N7H1 131 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 DUSP16Q9BY84 665 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 TKTL2Q9H0I9 626 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 CHST12Q9NRB3 414 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 PCDHGB4Q9UN71 923 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 PCDHGB5Q9Y5G0 923 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 XPO1O14980 1071 aaKnown RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 AP2A1O95782 977 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 YBX3P16989 372 aaKnown RBP eCLIP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 ALDH1A3P47895 512 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 GLUD2P49448 558 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 HARS2P49590 506 aaKnown RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 AFF1P51825 1210 aaKnown RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 PCSK7Q16549 785 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 EPGNQ6UW88 154 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 ARHGAP36Q6ZRI8 547 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 DSELQ8IZU8 1212 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 PCDH20Q8N6Y1 951 aaKnown RBP14.86□□□□□ -0.03
SCARB2-221ENST00000640341 ARRDC4Q8NCT1 418 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 GPRC5AQ8NFJ5 357 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 HASPINQ8TF76 798 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 MLPHQ9BV36 600 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms