RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 INTS10Q9NVR2 710 aaKnown RBP4.42□□□□□ -1.7
CCDC7-214ENST00000639453 GAR1Q9NY12 217 aaKnown RBP4.42□□□□□ -1.7
CCDC7-214ENST00000639453 ZNF624Q9P2J8 865 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-214ENST00000639453 MED16Q9Y2X0 877 aa4.42□□□□□ -1.7
CCDC7-214ENST00000639453 ATP6V0A2Q9Y487 856 aa4.42□□□□□ -1.7
CCDC7-214ENST00000639453 CEP83Q9Y592 693 aa4.42□□□□□ -1.7
CCDC7-214ENST00000639453 A0A087X0M5 115 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 GOLGA6L10A0A0M3HER8 536 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 C17orf113A0A1B0GUU1 675 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 A0A1B0GX30 115 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 MGEA5O60502 916 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 NEMFO60524 1076 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 KLHL41O60662 606 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 MTRF1O75570 445 aaKnown RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 BBOX1O75936 387 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 SNX4O95219 450 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 CSTBP04080 98 aaKnown RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 SFTPCP11686 197 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 ATP1A3P13637 1013 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 HOXD10P28358 340 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 DIO1P49895 249 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 SLC12A2P55011 1212 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 ARL4CP56559 192 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 B4GALNT1Q00973 533 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 CUL4AQ13619 759 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 PLA1AQ53H76 456 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 C10orf76Q5T2E6 689 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 AP1ARQ63HQ0 302 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 HAUS3Q68CZ6 603 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 CYB5RLQ6IPT4 315 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 TATDN1Q6P1N9 297 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 SHQ1Q6PI26 577 aaKnown RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 KRT74Q7RTS7 529 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 HEATR4Q86WZ0 1026 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 CCDC170Q8IYT3 715 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 LRRC43Q8N309 656 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 SLC15A4Q8N697 577 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 DNAJC5GQ8N7S2 189 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 AVL9Q8NBF6 648 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 NR4A3Q92570 626 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 CDCA5Q96FF9 252 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 RBM18Q96H35 190 aaKnown RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 ZNF845Q96IR2 970 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 FAM81BQ96LP2 452 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 C16orf45Q96MC5 204 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 TSGA13Q96PP4 275 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 TAAR9Q96RI9 348 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 PIGSQ96S52 555 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 EYA3Q99504 573 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 GPATCH1Q9BRR8 931 aaKnown RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 MAK16Q9BXY0 300 aaKnown RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 TXLNGYQ9BZA5 131 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 NUP62CLQ9H1M0 184 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 ITM2CQ9NQX7 267 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 ORC3Q9UBD5 711 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 VPS28Q9UK41 221 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 TRAF3IP3Q9Y228 551 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 MRPL11Q9Y3B7 192 aaKnown RBP4.41□□□□□ -1.7
CCDC7-214ENST00000639453 C2CD2Q9Y426 696 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 IL16Q14005 1332 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 ABCC9O60706 1549 aa4.41□□□□□ -1.7
CCDC7-214ENST00000639453 A0A087WV62 115 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 LINC00854A0A1B0GVQ3 168 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 RHPN2P1A8MT19 583 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 F5H0A9 414 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 CLIC1O00299 241 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 PSMA7O14818 248 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 INPPL1O15357 1258 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 THAP12O43422 761 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 DDHD2O94830 711 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 POLBP06746 335 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 CCDC172P0C7W6 258 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 ZNF853P0CG23 659 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 HLA-DPA1P20036 260 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 TBXAS1P24557 533 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 AKAP5P24588 427 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 MAPK3P27361 379 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 GNL1P36915 607 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 CD86P42081 329 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 MATR3P43243 847 aaKnown RBP eCLIP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 CACNB3P54284 484 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 BCAT1P54687 386 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 RRP1P56182 461 aaKnown RBP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 DCAF7P61962 342 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 AP2B1P63010 937 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 NKX6-1P78426 367 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 CFHR3Q02985 330 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 CCDC15Q0P6D6 951 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 PRPF4BQ13523 1007 aaKnown RBP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 EIF4A2Q14240 407 aaKnown RBP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 MFSD13AQ14CX5 517 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 PPP1R7Q15435 360 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 SEC23BQ15437 767 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 GFI1BQ5VTD9 330 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 RAB12Q6IQ22 244 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 GGT6Q6P531 493 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 ALKBH5Q6P6C2 394 aaKnown RBP4.4□□□□□ -1.71
CCDC7-214ENST00000639453 C11orf88Q6PI97 169 aa4.4□□□□□ -1.71
CCDC7-214ENST00000639453 OLFM4Q6UX06 510 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms