RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 RNF43Q68DV7 783 aa17.49■□□□□ 0.39
HNRNPU-217ENST00000638952 BCL2L14Q9BZR8 327 aa17.49■□□□□ 0.39
HNRNPU-217ENST00000638952 POMKQ9H5K3 350 aa17.49■□□□□ 0.39
HNRNPU-217ENST00000638952 ETNK2Q9NVF9 386 aa17.49■□□□□ 0.39
HNRNPU-217ENST00000638952 CNTNAP2Q9UHC6 1331 aa17.49■□□□□ 0.39
HNRNPU-217ENST00000638952 CDC40O60508 579 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■□□□□ 9
HNRNPU-217ENST00000638952 ADRB2P07550 413 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 ACAT1P24752 427 aaKnown RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 AMPD2Q01433 879 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 ACOX2Q99424 681 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 DPY30Q9C005 99 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 DDX43Q9NXZ2 648 aaKnown RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 REXO2Q9Y3B8 237 aaKnown RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 PTDSS1P48651 473 aaKnown RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 BROXQ5VW32 411 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 SUN5Q8TC36 379 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 SLC9A7Q96T83 725 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 APBA2Q99767 749 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 RSL24D1Q9UHA3 163 aaKnown RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 ZNF157P51786 506 aaPredicted RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 LIN54Q6MZP7 749 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 BRSK2Q8IWQ3 736 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 ITFG1Q8TB96 612 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 S100ZQ8WXG8 99 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 DNAJC19Q96DA6 116 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 OSMRQ99650 979 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 CLPBQ9H078 707 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 KCNQ5Q9NR82 932 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 TIMM13Q9Y5L4 95 aaPredicted RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 CCDC154A6NI56 674 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 TRDMT1O14717 391 aaKnown RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 LIASO43766 372 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 PABPC1P11940 636 aaKnown RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 PCNAP12004 261 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 RCVRNP35243 200 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 RPL5P46777 297 aaKnown RBP17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 KCNT2Q6UVM3 1135 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 NIPA1Q7RTP0 329 aa17.48■□□□□ 0.39
HNRNPU-217ENST00000638952 GPR182O15218 404 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 UNC5CO95185 931 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 CYP3A4P08684 503 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 DBTP11182 482 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 SKIV2L2P42285 1042 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 FGD3Q5JSP0 725 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ZDHHC17Q8IUH5 632 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 TBL1YQ9BQ87 522 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 TRPC4Q9UBN4 977 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 DSEQ9UL01 958 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 HBS1LQ9Y450 684 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 PCDHGA3Q9Y5H0 932 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 CASTOR2A6NHX0 329 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 PSMD11O00231 422 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 PAEPP09466 180 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 SLC6A3Q01959 620 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 PTSQ03393 145 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 PEG10Q86TG7 708 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 DNERQ8NFT8 737 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ADAM32Q8TC27 787 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 MID1IP1Q9NPA3 183 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 MRPL42Q9Y6G3 142 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 SPATA31D1Q6ZQQ2 1576 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 SLC12A8A0AV02 714 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 CRABP2P29373 138 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 RXRGP48443 463 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 NPY2RP49146 381 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ZNF846Q147U1 533 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 SLC45A4Q5BKX6 768 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 PWWP2AQ96N64 755 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 CORO1CQ9ULV4 474 aaPredicted RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 E5RJQ4 531 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 AGRPO00253 132 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ATP5BP06576 529 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ETS2P15036 469 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 EIF4BP23588 611 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 SLC26A3P40879 764 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 CCNG1P51959 295 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 SAMD4BQ5PRF9 694 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 RASSF6Q6ZTQ3 369 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 BPIFB6Q8NFQ5 453 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 TRAPPC12Q8WVT3 735 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 DLG3Q92796 817 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ZFYVE28Q9HCC9 887 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 CCDC162PA2VCL2 907 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ECDO95905 644 aaPredicted RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 THP07101 528 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ANXA6P08133 673 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 CNPP09543 421 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ERVK-10P10266 1014 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 SLC26A2P50443 739 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 PKNOX1P55347 436 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 BNC1Q01954 994 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 KYAT3Q6YP21 454 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 COMMD2Q86X83 199 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ZFPM1Q8IX07 1006 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 ALLCQ8N6M5 410 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 MNTQ99583 582 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 EPB41L4BQ9H329 900 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 KLHL28Q9NXS3 571 aa17.47■□□□□ 0.39
HNRNPU-217ENST00000638952 SPTLC1O15269 473 aa17.46■□□□□ 0.39
HNRNPU-217ENST00000638952 CD3EAPO15446 510 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms