RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	CDH7	Q9ULB5	785 aa		13.92	□□□□□ -0.18
KCNMA1-238	ENST00000638514	KPNA7	A9QM74	516 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	TNNC2	P02585	160 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ZNF143	P52747	638 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CDH8	P55286	799 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	NAB1	Q13506	487 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	HERC3	Q15034	1050 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	SMUG1	Q53HV7	270 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	GLRA4	Q5JXX5	417 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	WDR49	Q8IV35	697 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	PQLC3	Q8N755	202 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ADAM32	Q8TC27	787 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	PLEKHA8	Q96JA3	519 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	GPATCH2L	Q9NWQ4	482 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	TUBA8	Q9NY65	449 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CROT	Q9UKG9	612 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	VWA5A	O00534	786 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	FUCA1	P04066	466 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	SAT1	P21673	171 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	GPD1	P21695	349 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CRADD	P78560	199 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	PTK2B	Q14289	1009 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	RFTN1	Q14699	578 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	RAB6C	Q53S08	254 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	C16orf87	Q6PH81	154 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	DPP9	Q86TI2	863 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	FBXO16	Q8IX29	292 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CNPY3	Q9BT09	278 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	RAB6C	Q9H0N0	254 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	VPS33B	Q9H267	617 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ADA2	Q9NZK5	511 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	PLOD2	O00469	737 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	GIPC1	O14908	333 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ZBTB11	O95625	1053 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	BACE1	P56817	501 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	PDK2	Q15119	407 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ZNF699	Q32M78	642 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	SEL1L3	Q68CR1	1132 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	BRSK2	Q8IWQ3	736 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CENPS	Q8N2Z9	138 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CPSF7	Q8N684	471 aa	Known RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	FAM47B	Q8NA70	645 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	UBA3	Q8TBC4	463 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	MCRS1	Q96EZ8	462 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	SLC29A1	Q99808	456 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ARPC5L	Q9BPX5	153 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ANKRD60	Q9BZ19	345 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	TRPC7	Q9HCX4	862 aa		13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ADM5	C9JUS6	153 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	TRIM13	O60858	407 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	MPST	P25325	297 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	NXN	Q6DKJ4	435 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CMC1	Q7Z7K0	106 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CPNE9	Q8IYJ1	553 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	SNX15	Q9NRS6	342 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CDC14A	Q9UNH5	594 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	SNX13	Q9Y5W8	968 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	HDAC3	O15379	428 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	HTRA2	O43464	458 aa	Predicted RBP	13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	TADA2A	O75478	443 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	GCAT	O75600	419 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ADSL	P30566	484 aa	Predicted RBP	13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	PRAME	P78395	509 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CTBS	Q01459	385 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	MTX3	Q5HYI7	312 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	PCDH19	Q8TAB3	1148 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CASP10	Q92851	521 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ITPKC	Q96DU7	683 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ASB9	Q96DX5	294 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	GPATCH1	Q9BRR8	931 aa	Known RBP	13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	LRRC37A	A6NMS7	1700 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	ADGRA2	Q96PE1	1338 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	IL4R	P24394	825 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	NETO2	Q8NC67	525 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	TRPM4	Q8TD43	1214 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	RXFP2	Q8WXD0	754 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	FAM49B	Q9NUQ9	324 aa		13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.9	□□□□□ -0.18
KCNMA1-238	ENST00000638514	CCDC78	A2IDD5	438 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514		K7EPI3	171 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	H2AFY	O75367	372 aa	Known RBP	13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	ATE1	O95260	518 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	PDGFRA	P16234	1089 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	HOXD11	P31277	338 aa	Predicted RBP	13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	TNFSF9	P41273	254 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	PTGER2	P43116	358 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	ASPA	P45381	313 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	SUPT20HL1	Q3ZLR7	823 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	DCAF6	Q58WW2	860 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	SLC9A4	Q6AI14	798 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	PLD6	Q8N2A8	252 aa	Known RBP	13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	TMEM130	Q8N3G9	435 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	SGF29	Q96ES7	293 aa		13.89	□□□□□ -0.19
KCNMA1-238	ENST00000638514	NPAS2	Q99743	824 aa		13.89	□□□□□ -0.19

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