RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 RPS6KA2Q15349 733 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 MAPRE2Q15555 327 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SNCBQ16143 134 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 AANATQ16613 207 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 CYP2A13Q16696 494 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 DGKDQ16760 1214 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 MEP1BQ16820 701 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 MYLK3Q32MK0 819 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 ZNF628Q5EBL2 1059 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 FSCBQ5H9T9 825 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 NHSL2Q5HYW2 709 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 CEP78Q5JTW2 689 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SPDYAQ5MJ70 313 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 LIN9Q5TKA1 542 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 RRAGBQ5VZM2 374 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 NAIF1Q69YI7 327 aaPredicted RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 ATL3Q6DD88 541 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 ADALQ6DHV7 355 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 MFSD5Q6N075 450 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 ZNF585AQ6P3V2 769 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 NOTUMQ6P988 496 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SASS6Q6UVJ0 657 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 RANBP10Q6VN20 620 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SLC36A4Q6YBV0 504 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 FAM83HQ6ZRV2 1179 aaPredicted RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 TAS2R42Q7RTR8 314 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 PLPPR4Q7Z2D5 763 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SPATA21Q7Z572 469 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 NANOGNBQ7Z5D8 188 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 GPR142Q7Z601 462 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 FAM83AQ86UY5 434 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 GATAD2AQ86YP4 633 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 ZCCHC7Q8N3Z6 543 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 LINC00482Q8N8I6 264 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 DNAAF3Q8N9W5 541 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 POGLUT1Q8NBL1 392 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 CHST14Q8NCH0 376 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SHCBP1Q8NEM2 672 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 OR13C2Q8NGS9 318 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 OR9A1PQ8NGU1 263 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 OR6S1Q8NH40 331 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 MYCBPAPQ8TBZ2 947 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 URGCPQ8TCY9 931 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 TRPC4APQ8TEL6 797 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 TSPEARQ8WU66 669 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SCFD2Q8WU76 684 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SLC13A3Q8WWT9 602 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 ALG3Q92685 438 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 EXT2Q93063 718 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 ALG14Q96F25 216 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SLC47A1Q96FL8 570 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 PIWIL1Q96J94 861 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 MAML3Q96JK9 1138 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 FER1L6-AS2Q96M78 137 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 USP28Q96RU2 1077 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 ORAI2Q96SN7 254 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 RUFY1Q96T51 708 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 MNTQ99583 582 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 EIF3CQ99613 913 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 HNRNPABQ99729 332 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 TSG101Q99816 390 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 C19orf43Q9BQ61 176 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 TRIM62Q9BVG3 475 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 NUSAP1Q9BXS6 441 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 CRNKL1Q9BZJ0 848 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 FTOQ9C0B1 505 aaKnown RBP eCLIP3.11□□□□□ -1.91
VIM-210ENST00000637053 ZNF518BQ9C0D4 1074 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 CCSER1Q9C0I3 900 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 MS4A5Q9H3V2 200 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 ST6GALNAC4Q9H4F1 302 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 AZI2Q9H6S1 392 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 C14orf93Q9H972 538 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 UCK1Q9HA47 277 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 UPF2Q9HAU5 1272 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 SPACA1Q9HBV2 294 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 A1CFQ9NQ94 594 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 SLC35C2Q9NQQ7 365 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SPATS2LQ9NUQ6 558 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 TMEM184CQ9NVA4 438 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 FAM86C1Q9NVL1 165 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 POLR3BQ9NW08 1133 aaPredicted RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 OXSMQ9NWU1 459 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 GFOD1Q9NXC2 390 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 EHD2Q9NZN4 543 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 GMIPQ9P107 970 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 CFAP97Q9P2B7 532 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 IGSF9Q9P2J2 1179 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 MYO1AQ9UBC5 1043 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 CD300AQ9UGN4 299 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 RSPH14Q9UHP6 348 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 BAIAP2L1Q9UHR4 511 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 ITGA11Q9UKX5 1188 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 OGDHLQ9ULD0 1010 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SNX6Q9UNH7 406 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 STX8Q9UNK0 236 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SCAF8Q9UPN6 1271 aaKnown RBP3.11□□□□□ -1.91
VIM-210ENST00000637053 AGAP1Q9UPQ3 857 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 SLC8A2Q9UPR5 921 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 GAB2Q9UQC2 676 aa3.11□□□□□ -1.91
VIM-210ENST00000637053 CHKBQ9Y259 395 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms