RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SATL1Q86VE3 508 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 NPAS2Q99743 824 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 CPNE1Q99829 537 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 ACE2Q9BYF1 805 aaPredicted RBP14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 LRRC40Q9H9A6 602 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 MKS1Q9NXB0 559 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 TLK1Q9UKI8 766 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 TRIM13O60858 407 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 FYNP06241 537 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 GSTA2P09210 222 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 PTPN1P18031 435 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 VCLP18206 1134 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 ADRA1BP35368 520 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 GRIA2P42262 883 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 THOP1P52888 689 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 SEPT6Q14141 434 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 ZBTB6Q15916 424 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 PSTKQ8IV42 348 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 WNT8BQ93098 351 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 KLHL4Q9C0H6 718 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 SLC2A6Q9UGQ3 507 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 UBQLN1Q9UMX0 589 aaKnown RBP14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 ARHGAP26Q9UNA1 814 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 TLL2Q9Y6L7 1015 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 TTC3P53804 2025 aa14.3□□□□□ -0.12
CACNA1A-228ENST00000636610 AURKAO14965 403 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 PMPCBO75439 489 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 TRPA1O75762 1119 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 FESP07332 822 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 MMP3P08254 477 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 NPR3P17342 541 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 CNTFP26441 200 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 CRABP2P29373 138 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 PCSK7Q16549 785 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 FAM91A1Q658Y4 838 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 ARHGAP17Q68EM7 881 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 STRADAQ7RTN6 431 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 FBXW8Q8N3Y1 598 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 TTC16Q8NEE8 873 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 CNBD2Q96M20 576 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 PAAF1Q9BRP4 392 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 ADAMTS10Q9H324 1103 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 MROH8Q9H579 483 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 DDX43Q9NXZ2 648 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 TTC24A2A3L6 582 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 PEX1O43933 1283 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 MOCS2O96007 188 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 YBX3P16989 372 aaKnown RBP eCLIP14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 CXCR3P49682 368 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 SERPINB8P50452 374 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 LIMK2P53671 638 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 TMCO4Q5TGY1 634 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 UNC93AQ86WB7 457 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 PDSS2Q86YH6 399 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 ZDHHC17Q8IUH5 632 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 PCDH20Q8N6Y1 951 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 PPP2R3CQ969Q6 453 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 IFT43Q96FT9 208 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 NDNQ99608 321 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 DUSP16Q9BY84 665 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 TKTL2Q9H0I9 626 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 SEMA6AQ9H2E6 1030 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 CHST12Q9NRB3 414 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 RNF181Q9P0P0 153 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 OR12D3Q9UGF7 316 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 STAP1Q9ULZ2 295 aa14.29□□□□□ -0.12
CACNA1A-228ENST00000636610 CASTOR2A6NHX0 329 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CTSHP09668 335 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 FGFR3P22607 806 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 PIK3R1P27986 724 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 NOS2P35228 1153 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CACNB2Q08289 660 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CNPY1Q3B7I2 92 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 DCAF4L1Q3SXM0 396 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 GRTP1Q5TC63 336 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 TTC39CQ8N584 583 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 GPRC5AQ8NFJ5 357 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 ACMSDQ8TDX5 336 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 ILKAPQ9H0C8 392 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 PLEKHA5Q9HAU0 1116 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 MTF2Q9Y483 593 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 PCDHB12Q9Y5F1 795 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 TNS1Q9HBL0 1735 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 C9IYK1 514 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 PIRO00625 290 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 AHCYL1O43865 530 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 FKBP6O75344 327 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 GPR32O75388 356 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CSPG5O95196 566 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 SPATA31D3P0C874 917 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 SMIM10L2AP0DMW4 78 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 SMIM10L2BP0DMW5 78 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 CHRNA4P43681 627 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 GJA9P57773 515 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 MS4A2Q01362 244 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 FOLH1Q04609 750 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 FLOT2Q14254 428 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 AP1ARQ63HQ0 302 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 SPATA31D4Q6ZUB0 917 aa14.28□□□□□ -0.12
CACNA1A-228ENST00000636610 TMC7Q7Z402 723 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms