RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TCOF1Q13428 1488 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CABYRO75952 493 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 JCHAINP01591 159 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 IL1R1P14778 569 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 GNSP15586 552 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ITGA2P17301 1181 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 KLRC1P26715 233 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 MAPK8P45983 427 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 CCT3P49368 545 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 DGUOKQ16854 277 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ZBTB49Q6ZSB9 765 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 TPGS1Q6ZTW0 290 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 METTL6Q8TCB7 284 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ERLEC1Q96DZ1 483 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 PHF21BQ96EK2 531 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 FAM111AQ96PZ2 611 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 SMPD4Q9NXE4 827 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 PDP2Q9P2J9 529 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 RPS6KA6Q9UK32 745 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ANGPT4Q9Y264 503 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF510Q9Y2H8 683 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 MRPS17Q9Y2R5 130 aaKnown RBP5.64□□□□□ -1.51
SCN1A-209ENST00000635750 ARHGEF40Q8TER5 1519 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 GAKO14976 1311 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 IGSF1Q8N6C5 1336 aa5.64□□□□□ -1.51
SCN1A-209ENST00000635750 PP2D1A8MPX8 630 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SERPINA1P01009 418 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 APOC1P02654 83 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CYP11B1P15538 503 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 NUMBP49757 651 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MECP2P51608 486 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PKP1Q13835 747 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 RASAL3Q86YV0 1011 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ADHFE1Q8IWW8 467 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 FBXO16Q8IX29 292 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 BEND7Q8N7W2 519 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MARCH10Q8NA82 808 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 OR2L5Q8NG80 312 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SEC16BQ96JE7 1060 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TRHDEQ9UKU6 1024 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PSMD13Q9UNM6 376 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CRB1P82279 1406 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 A0A096LPK6 155 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SMCO3A2RU48 225 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MAGEA13PA6NCF6 341 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 KPNA4O00629 521 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SLC28A2O43868 658 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TSPAN9O75954 239 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CYP1A1P04798 512 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 NR2F1P10589 423 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ATP5C1P36542 298 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 COILP38432 576 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SRP54P61011 504 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MYBPC2Q14324 1141 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ZCWPW2Q504Y3 356 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ARMC8Q8IUR7 673 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 COLGALT1Q8NBJ5 622 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF473Q8WTR7 871 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PGLYRP2Q96PD5 576 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TRIM2Q9C040 744 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MFHAS1Q9Y4C4 1052 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 NUP153P49790 1475 aaKnown RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CCDC162PA2VCL2 907 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TRIM3O75382 744 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SMNDC1O75940 238 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 FARP2O94887 1054 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 IFNA6P05013 189 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ADH1AP07327 375 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ALOX12P18054 663 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SLC26A3P40879 764 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 POLD2P49005 469 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TAS2R41P59536 307 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CRY1Q16526 586 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MPPE1Q53F39 396 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ZC2HC1CQ53FD0 456 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 HYIQ5T013 277 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PDPK2PQ6A1A2 396 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 HSDL2Q6YN16 418 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 C16orf59Q7L2K0 433 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TMC8Q8IU68 726 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PHYKPLQ8IUZ5 450 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 FAM126BQ8IXS8 530 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 DNERQ8NFT8 737 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 OR10G6Q8NH81 332 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 FAM81AQ8TBF8 368 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 GRIN3AQ8TCU5 1115 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 OR8D1Q8WZ84 308 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 AP3S1Q92572 193 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MYLPFQ96A32 169 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MIEF2Q96C03 454 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 TEKT5Q96M29 485 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 CHMP1AQ9HD42 196 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN1A-209ENST00000635750 VPS4AQ9UN37 437 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 COLEC10Q9Y6Z7 277 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 SPATA31A6Q5VVP1 1343 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 PNPLA7Q6ZV29 1317 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ISM1B1AKI9 464 aa5.63□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF879B4DU55 563 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms