RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 ALYREFQ86V81 257 aaKnown RBP13.99□□□□□ -0.17
PFDN5-220ENST00000628881 FAM160A2Q8N612 972 aaPredicted RBP13.99□□□□□ -0.17
PFDN5-220ENST00000628881 SPC24Q8NBT2 197 aa13.99□□□□□ -0.17
PFDN5-220ENST00000628881 FRS2Q8WU20 508 aa13.99□□□□□ -0.17
PFDN5-220ENST00000628881 HSPH1Q92598 858 aa13.99□□□□□ -0.17
PFDN5-220ENST00000628881 PTPRN2Q92932 1015 aa13.99□□□□□ -0.17
PFDN5-220ENST00000628881 ARHGEF2Q92974 986 aaKnown RBP13.99□□□□□ -0.17
PFDN5-220ENST00000628881 RSPH9Q9H1X1 276 aaPredicted RBP13.99□□□□□ -0.17
PFDN5-220ENST00000628881 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.99□□□□□ -0.17
PFDN5-220ENST00000628881 USP36Q9P275 1121 aaKnown RBP13.99□□□□□ -0.17
PFDN5-220ENST00000628881 IGHV1OR15-9A0A0B4J2B8 117 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 SOWAHDA6NJG2 315 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 GOLGA6L6A8MZA4 724 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 CBX4O00257 560 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ZMPSTE24O75844 475 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 RHOBTB1O94844 696 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 NDUFA10O95299 355 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 MT-CO1P00395 513 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 RARAP10276 462 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ACADMP11310 421 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 SRCP12931 536 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 GOT1P17174 413 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 GLDCP23378 1020 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ARHGAP25P42331 645 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 HCAR3P49019 387 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 CLCN6P51797 869 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 YBEYP58557 167 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-220ENST00000628881 RPS14P62263 151 aaKnown RBP13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ARF5P84085 180 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ZBTB16Q05516 673 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 SLC20A2Q08357 652 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 POLD3Q15054 466 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-220ENST00000628881 DLG2Q15700 870 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ELF2Q15723 593 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ACCSLQ4AC99 568 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 PMS2CLQ68D20 193 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ZNF776Q68DI1 518 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-220ENST00000628881 TXNRD3NBQ6F5E7 133 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 RETSATQ6NUM9 610 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 LINGO4Q6UY18 593 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 SLC36A4Q6YBV0 504 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 RFX8Q6ZV50 586 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 CACUL1Q86Y37 369 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ATP11CQ8NB49 1132 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 RUBCNQ92622 972 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 LOXL4Q96JB6 756 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 DUSP15Q9H1R2 295 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-220ENST00000628881 NOL6Q9H6R4 1146 aaKnown RBP13.98□□□□□ -0.17
PFDN5-220ENST00000628881 LUC7LQ9NQ29 371 aaKnown RBP13.98□□□□□ -0.17
PFDN5-220ENST00000628881 ITM2CQ9NQX7 267 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 NCDNQ9UBB6 729 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 MBD1Q9UIS9 605 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-220ENST00000628881 GMEB2Q9UKD1 530 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 CYP8B1Q9UNU6 501 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 PCDHA13Q9Y5I0 950 aa13.98□□□□□ -0.17
PFDN5-220ENST00000628881 EPN1Q9Y6I3 576 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-220ENST00000628881 H3BRJ5 948 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 DAPK3O43293 454 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 RNASEH1O60930 286 aaKnown RBP13.97□□□□□ -0.17
PFDN5-220ENST00000628881 IPO7O95373 1038 aaKnown RBP13.97□□□□□ -0.17
PFDN5-220ENST00000628881 IGLV3-19P01714 112 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 VAV1P15498 845 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
PFDN5-220ENST00000628881 ARL4AP40617 200 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 SSR1P43307 286 aaKnown RBP13.97□□□□□ -0.17
PFDN5-220ENST00000628881 SERPINH1P50454 418 aaKnown RBP13.97□□□□□ -0.17
PFDN5-220ENST00000628881 TPMTP51580 245 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 GEMIN4P57678 1058 aaKnown RBP13.97□□□□□ -0.17
PFDN5-220ENST00000628881 DPYSQ14117 519 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 ELAVL3Q14576 367 aaKnown RBP13.97□□□□□ -0.17
PFDN5-220ENST00000628881 MESDQ14696 234 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 PARP15Q460N3 678 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 CPNE8Q86YQ8 564 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 UMODL1-AS1Q8N2C9 162 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 STK40Q8N2I9 435 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 FRMD1Q8N878 549 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 BAG1Q99933 345 aaPredicted RBP13.97□□□□□ -0.17
PFDN5-220ENST00000628881 CD93Q9NPY3 652 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 CWC15Q9P013 229 aaKnown RBP13.97□□□□□ -0.17
PFDN5-220ENST00000628881 HPCAL4Q9UM19 191 aa13.97□□□□□ -0.17
PFDN5-220ENST00000628881 SPAG17Q6Q759 2223 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 ZSCAN5CA6NGD5 496 aaPredicted RBP13.96□□□□□ -0.17
PFDN5-220ENST00000628881 TMEM110-MUSTN1A8MSY1 372 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 RASA4BC9J798 803 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 K7ERQ8 282 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 MAP3K13O43283 966 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 RASA4O43374 803 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 SMAD6O43541 496 aaKnown RBP13.96□□□□□ -0.17
PFDN5-220ENST00000628881 KDELR3O43731 214 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 EPN2O95208 641 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 DNTTP04053 509 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 RETP07949 1114 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 ERCC2P18074 760 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 CD6P30203 668 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 OXTRP30559 389 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 NDST2P52849 883 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 HADHBP55084 474 aaKnown RBP13.96□□□□□ -0.17
PFDN5-220ENST00000628881 TAS2R40P59535 323 aa13.96□□□□□ -0.17
PFDN5-220ENST00000628881 TTC31Q49AM3 519 aaPredicted RBP13.96□□□□□ -0.17
PFDN5-220ENST00000628881 SPDYCQ5MJ68 293 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms