RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 HINFPQ9BQA5 517 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 PRSS16Q9NQE7 514 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 ITM2CQ9NQX7 267 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 USP36Q9P275 1121 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 VPS51Q9UID3 782 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 NCKAP1Q9Y2A7 1128 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 SNX10Q9Y5X0 201 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 EML5Q05BV3 1969 aa14.34□□□□□ -0.11
SNRPA1-216ENST00000626000 C1QTNF3-AMACRE9PGA6 284 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 FAM72CH0Y354 149 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 ADH1BP00325 375 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 HLA-EP13747 358 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 COPAP53621 1224 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 ACCSLQ4AC99 568 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 FAM72AQ5TYM5 149 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 PMS2CLQ68D20 193 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 FAM72DQ6L9T8 149 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 RFX8Q6ZV50 586 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 POLNQ7Z5Q5 900 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 FAM72BQ86X60 149 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 FAM160A2Q8N612 972 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 PCDH20Q8N6Y1 951 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 ATP11CQ8NB49 1132 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 OR8D1Q8WZ84 308 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 ISG20Q96AZ6 181 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 ARHGEF26Q96DR7 871 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 SPON2Q9BUD6 331 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 ACE2Q9BYF1 805 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 TRIM7Q9C029 511 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 MKRN2Q9H000 416 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 SPTLC3Q9NUV7 552 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 POLR3BQ9NW08 1133 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 FZD4Q9ULV1 537 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 CHD5Q8TDI0 1954 aa14.33□□□□□ -0.12
SNRPA1-216ENST00000626000 ANTXRLA6NF34 631 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 CBX4O00257 560 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 SIN3BO75182 1162 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 EPN2O95208 641 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 C5AR1P21730 350 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 CD6P30203 668 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 SERPINB6P35237 376 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 SLC1A1P43005 524 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 MAGEA1P43355 309 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 SERPINH1P50454 418 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 HADHBP55084 474 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 PDK2Q15119 407 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 DLG2Q15700 870 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 RAB6CQ53S08 254 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 PPP6R3Q5H9R7 873 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 SYCP2LQ5T4T6 812 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 C9orf64Q5T6V5 341 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 TMCO4Q5TGY1 634 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 ASCL5Q7RTU5 278 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 DNAAF5Q86Y56 855 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 PLPP6Q8IY26 295 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 CADM4Q8NFZ8 388 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 ARHGEF2Q92974 986 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 RPL10LQ96L21 214 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 PSMB7Q99436 277 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 PHOX2BQ99453 314 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 RAB6CQ9H0N0 254 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 DUSP15Q9H1R2 295 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 DNAI1Q9UI46 699 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 SLCO3A1Q9UIG8 710 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 NEU3Q9UQ49 428 aa14.32□□□□□ -0.12
SNRPA1-216ENST00000626000 FAM186AA6NE01 2351 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 A0A0A6YYK5 440 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 IGHV1OR15-9A0A0B4J2B8 117 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 A0A0D9SEW6 157 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 ARHGAP42A6NI28 874 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 TTC34A8MYJ7 566 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 MCF2LO15068 1137 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 KDELR3O43731 214 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 NRDCO43847 1150 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 NDUFA10O95299 355 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 PRNPP04156 253 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 SRCP12931 536 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 CTSOP43234 321 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 SSR1P43307 286 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 TPMTP51580 245 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 RPS14P62263 151 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 RPL6Q02878 288 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 SLC25A11Q02978 314 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 SRSF5Q13243 272 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 KRT81Q14533 505 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 INO80DQ53TQ3 878 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 ARTNQ5T4W7 220 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 VSIG1Q86XK7 387 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 ZNF354CQ86Y25 554 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 PYROXD2Q8N2H3 581 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 ARFGAP1Q8N6T3 406 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 OR7D4Q8NG98 312 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 OR52K2Q8NGK3 314 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 SLC35G2Q8TBE7 412 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 FRS2Q8WU20 508 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 PTPRN2Q92932 1015 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 LRIG1Q96JA1 1093 aa14.31□□□□□ -0.12
SNRPA1-216ENST00000626000 PEBP4Q96S96 227 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms