RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 SLCO1B1Q9Y6L6 691 aa11.12□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3DA0A087WVF3 549 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3IA0A087WXS9 549 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3EA0A087X179 549 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3KA0A087X1G2 549 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 A0A0D9SEW6 157 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 A0A1W2PPC4 97 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 ILVBLA1L0T0 632 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3FA6NER0 549 aaPredicted RBP11.11□□□□□ -0.63
SSBP4-215ENST00000625926 C2CD4BA6NLJ0 364 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SMTNL1A8MU46 457 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3LB9A6J9 549 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 C1QTNF3-AMACRE9PGA6 284 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 ALOX15BO15296 676 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 BNIP3LO60238 219 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SNAP91O60641 907 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 MT-CO1P00395 513 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 CALB1P05937 261 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3HP0C7X1 549 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SRCP12931 536 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 ATP1A3P13637 1013 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 FERP16591 822 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 PTPN9P43378 593 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 CCR5P51681 352 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 CLCN6P51797 869 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 PTP4A2Q12974 167 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SUZ12Q15022 739 aaKnown RBP11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TRIP6Q15654 476 aaKnown RBP11.11□□□□□ -0.63
SSBP4-215ENST00000625926 CDO1Q16878 200 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 C15orf59Q2T9L4 293 aaPredicted RBP11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3GQ6DHY5 549 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3CQ6IPX1 549 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 ZNF783Q6ZMS7 281 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 Q6ZVU0 165 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 STRADAQ7RTN6 431 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TFAP2DQ7Z6R9 452 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 ADAT2Q7Z6V5 191 aaKnown RBP11.11□□□□□ -0.63
SSBP4-215ENST00000625926 PHF13Q86YI8 300 aaPredicted RBP11.11□□□□□ -0.63
SSBP4-215ENST00000625926 NAXDQ8IW45 347 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 TBC1D3Q8IZP1 549 aaPredicted RBP11.11□□□□□ -0.63
SSBP4-215ENST00000625926 DCAF4L2Q8NA75 395 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 ATP11CQ8NB49 1132 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 JOSD2Q8TAC2 188 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SKA1Q96BD8 255 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 CCDC114Q96M63 670 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 PSMB7Q99436 277 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 AGPAT1Q99943 283 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 ORAI3Q9BRQ5 295 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SPON2Q9BUD6 331 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SELENOOQ9BVL4 669 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 IL21RQ9HBE5 538 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SEPT11Q9NVA2 429 aaKnown RBP11.11□□□□□ -0.63
SSBP4-215ENST00000625926 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
SSBP4-215ENST00000625926 OR12D3Q9UGF7 316 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 VPS51Q9UID3 782 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SARDHQ9UL12 918 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 ANKRD6Q9Y2G4 727 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 PCDHGB2Q9Y5G2 931 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SNX11Q9Y5W9 270 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 MYOFQ9NZM1 2061 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 MAST4O15021 2626 aa11.11□□□□□ -0.63
SSBP4-215ENST00000625926 SIGLEC16A6NMB1 481 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 K7ERQ8 282 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 SLC7A4O43246 635 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 TRIM16O95361 564 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 GJB6O95452 261 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 RFC1P35251 1148 aaPredicted RBP11.1□□□□□ -0.63
SSBP4-215ENST00000625926 DRD3P35462 400 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 ADPRHP54922 357 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 GSCP56915 257 aaPredicted RBP11.1□□□□□ -0.63
SSBP4-215ENST00000625926 C21orf59P57076 290 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 FAM193AP78312 1265 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 NRG1Q02297 640 aaPredicted RBP11.1□□□□□ -0.63
SSBP4-215ENST00000625926 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
SSBP4-215ENST00000625926 SLC20A2Q08357 652 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 ARTNQ5T4W7 220 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 RETSATQ6NUM9 610 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 WDR59Q6PJI9 974 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 DBX2Q6ZNG2 339 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 C3orf20Q8ND61 904 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 SETD7Q8WTS6 366 aaKnown RBP11.1□□□□□ -0.63
SSBP4-215ENST00000625926 CENPIQ92674 756 aaPredicted RBP11.1□□□□□ -0.63
SSBP4-215ENST00000625926 FAM131CQ96AQ9 280 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 CAMK1GQ96NX5 476 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 ACE2Q9BYF1 805 aaPredicted RBP11.1□□□□□ -0.63
SSBP4-215ENST00000625926 OSBPL2Q9H1P3 480 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 KDM4CQ9H3R0 1056 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 RETREG1Q9H6L5 497 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 EBF2Q9HAK2 575 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
SSBP4-215ENST00000625926 WASF3Q9UPY6 502 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 FNDC3AQ9Y2H6 1198 aaKnown RBP11.1□□□□□ -0.63
SSBP4-215ENST00000625926 MYH10P35580 1976 aa11.1□□□□□ -0.63
SSBP4-215ENST00000625926 EML5Q05BV3 1969 aa11.09□□□□□ -0.63
SSBP4-215ENST00000625926 ANKRD62A6NC57 917 aa11.09□□□□□ -0.63
SSBP4-215ENST00000625926 C10orf142B7Z368 130 aa11.09□□□□□ -0.63
SSBP4-215ENST00000625926 CBX4O00257 560 aa11.09□□□□□ -0.63
SSBP4-215ENST00000625926 KCNK3O14649 394 aa11.09□□□□□ -0.63
SSBP4-215ENST00000625926 VILLO15195 856 aa11.09□□□□□ -0.63
SSBP4-215ENST00000625926 TEX33O43247 280 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms