RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 LENG8Q96PV6 779 aaPredicted RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 GATA5Q9BWX5 397 aaPredicted RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 WDR55Q9H6Y2 383 aaPredicted RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 PACSIN3Q9UKS6 424 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SLC39A10Q9ULF5 831 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 RALGAPA2Q2PPJ7 1873 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 ZNF638Q14966 1978 aaKnown RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 PEX2P28328 305 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SERPINB5P36952 375 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 CCR10P46092 362 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 PAPOLAP51003 745 aaKnown RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 CDC42EP1Q00587 391 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SEMA3BQ13214 749 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 ITGA7Q13683 1181 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 GPRIN1Q7Z2K8 1008 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 TOP6BLQ8N6T0 577 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 GDPD5Q8WTR4 605 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 JADE3Q92613 823 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 VPS39Q96JC1 886 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 GBP5Q96PP8 586 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 GBA3Q9H227 469 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 G3BP2Q9UN86 482 aaKnown RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 IPPQ9Y573 584 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SMIM35A0A1B0GVV1 85 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 TMEM114B3SHH9 223 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 PDHXO00330 501 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 NEMP1O14524 444 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 FAM200BP0CF97 657 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 NCAM1P13591 858 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 RAG1P15918 1043 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 MPSTP25325 297 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 NMBRP28336 390 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 XKR4Q5GH76 650 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SREK1Q8WXA9 508 aaKnown RBP11.48□□□□□ -0.57
VARS2-213ENST00000625423 KCNK16Q96T55 309 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 TCF7L2Q9NQB0 619 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 DDIT4Q9NX09 232 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 SSX2IPQ9Y2D8 614 aa11.48□□□□□ -0.57
VARS2-213ENST00000625423 TK2O00142 265 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 TIMM44O43615 452 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 USP17L7P0C7H9 530 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 AXLP30530 894 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 AQP4P55087 323 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 DAOAP59103 153 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 HNRNPDQ14103 355 aaKnown RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 GRM3Q14832 879 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 NTAN1Q96AB6 310 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 SLC10A4Q96EP9 437 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 MAML3Q96JK9 1138 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 TRAPPC9Q96Q05 1148 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 SLC9A7Q96T83 725 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 KLHL4Q9C0H6 718 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 TASP1Q9H6P5 420 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 CRTAC1Q9NQ79 661 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 OXSMQ9NWU1 459 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 FBXW11Q9UKB1 542 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 GLDCP23378 1020 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 PRDX6P30041 224 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 MTTPP55157 894 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 POLE2P56282 527 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 MSLNQ13421 630 aaPredicted RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 CELF6Q96J87 481 aaKnown RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 ZFP42Q96MM3 310 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 RTKNQ9BST9 563 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 ACE2Q9BYF1 805 aaPredicted RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 ILKAPQ9H0C8 392 aaPredicted RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 TIMM13Q9Y5L4 95 aaPredicted RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 AIM2O14862 343 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 NCAM2O15394 837 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 PHGDHO43175 533 aaKnown RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 STRNO43815 780 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 AP1G2O75843 785 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 JCHAINP01591 159 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 EPHA3P29320 983 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 GLRBP48167 497 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 CSE1LP55060 971 aaKnown RBP11.47□□□□□ -0.57
VARS2-213ENST00000625423 PCBP1Q15365 356 aaKnown RBP eCLIP11.47□□□□□ -0.57
VARS2-213ENST00000625423 TRIP10Q15642 601 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 PPM1LQ5SGD2 360 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 EDEM1Q92611 657 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 APBA2Q99767 749 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 SMOQ99835 787 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 MCMBPQ9BTE3 642 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 ABHD16BQ9H3Z7 469 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 TMEM30AQ9NV96 361 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 ZDHHC7Q9NXF8 308 aa11.47□□□□□ -0.57
VARS2-213ENST00000625423 MAGEB16A2A368 324 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 MBLAC1A4D2B0 266 aaPredicted RBP11.46□□□□□ -0.57
VARS2-213ENST00000625423 ERI2A8K979 691 aaKnown RBP11.46□□□□□ -0.57
VARS2-213ENST00000625423 PTGESO14684 152 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 TREHO43280 583 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 AVPR1AP37288 418 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 NPY2RP49146 381 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 AIF1P55008 147 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 SCAPQ12770 1279 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 FRG1Q14331 258 aaKnown RBP11.46□□□□□ -0.57
VARS2-213ENST00000625423 PRAMEF19Q5SWL8 479 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 METTL21CQ5VZV1 264 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms