RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 EPHX1P07099 455 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 VAV1P15498 845 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 GABRG2P18507 467 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 AMPD1P23109 780 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 KDELR1P24390 212 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 MARCKSL1P49006 195 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 POLD3Q15054 466 aaPredicted RBP14.65□□□□□ -0.06
CBWD3-217ENST00000621474 LINGO4Q6UY18 593 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 SH2D3CQ8N5H7 860 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 ZBTB44Q8NCP5 570 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 TSTD1Q8NFU3 115 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 PTPRN2Q92932 1015 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 HMCESQ96FZ2 354 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 ZNF670Q9BS34 389 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 C2orf49Q9BVC5 232 aaPredicted RBP14.65□□□□□ -0.06
CBWD3-217ENST00000621474 SLC6A17Q9H1V8 727 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 ATP13A1Q9HD20 1204 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 RCOR3Q9P2K3 495 aaPredicted RBP14.65□□□□□ -0.06
CBWD3-217ENST00000621474 EBF1Q9UH73 591 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 HCN4Q9Y3Q4 1203 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 CAPN6Q9Y6Q1 641 aa14.65□□□□□ -0.06
CBWD3-217ENST00000621474 MACROD2A1Z1Q3 448 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 H3BRJ5 948 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 K7ERQ8 282 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 CBX4O00257 560 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 ZNF821O75541 412 aaPredicted RBP14.64□□□□□ -0.07
CBWD3-217ENST00000621474 C7P10643 843 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 SRCP12931 536 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 ARL4AP40617 200 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 KIF5AQ12840 1032 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 CAMK2GQ13555 558 aaPredicted RBP14.64□□□□□ -0.07
CBWD3-217ENST00000621474 HNRNPA1L2Q32P51 320 aaKnown RBP14.64□□□□□ -0.07
CBWD3-217ENST00000621474 ANO7Q6IWH7 933 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 DAAM2Q86T65 1068 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 RHOT1Q8IXI2 618 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 ABCA7Q8IZY2 2146 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 PCDH19Q8TAB3 1148 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 CELF6Q96J87 481 aaKnown RBP14.64□□□□□ -0.07
CBWD3-217ENST00000621474 PPP1R9BQ96SB3 815 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 SLC39A8Q9C0K1 460 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 PRSS16Q9NQE7 514 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 NUMA1Q14980 2115 aa14.64□□□□□ -0.07
CBWD3-217ENST00000621474 RASA4BC9J798 803 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 RASA4O43374 803 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 SMAD6O43541 496 aaKnown RBP14.63□□□□□ -0.07
CBWD3-217ENST00000621474 SPOPO43791 374 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 ATP9BO43861 1147 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 APBB3O95704 486 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 NDUFV2P19404 249 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 FNTBP49356 437 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 YBEYP58557 167 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-217ENST00000621474 KRT81Q14533 505 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 PDK2Q15119 407 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 PARP15Q460N3 678 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 C9orf64Q5T6V5 341 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 HEATR6Q6AI08 1181 aaKnown RBP14.63□□□□□ -0.07
CBWD3-217ENST00000621474 IL31Q6EBC2 164 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 SDE2Q6IQ49 451 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 PQLC3Q8N755 202 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 KCTD6Q8NC69 237 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 KRT35Q92764 455 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 MRGPRX1Q96LB2 322 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 ZNF830Q96NB3 372 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-217ENST00000621474 SPON2Q9BUD6 331 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 CALN1Q9BXU9 219 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 FAM126AQ9BYI3 521 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-217ENST00000621474 POLMQ9NP87 494 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-217ENST00000621474 CD93Q9NPY3 652 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 CCDC163A0A0D9SF12 145 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 DAPK3O43293 454 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 PSTPIP1O43586 416 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 KDELR3O43731 214 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 LILRB5O75023 590 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 SIN3BO75182 1162 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 TNNT1P13805 278 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 ETFBP38117 255 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 NDST2P52849 883 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 PTPN5P54829 565 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 ST8SIA6P61647 398 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 SERINC3Q13530 473 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 E2F5Q15329 346 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 ANKRD20A8PQ5CZ79 823 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 NCBP2-AS2Q69YL0 99 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 ARHGAP36Q6ZRI8 547 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 ZNF662Q6ZS27 426 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 HMGB4Q8WW32 186 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 CALR3Q96L12 384 aaKnown RBP14.63□□□□□ -0.07
CBWD3-217ENST00000621474 TPSD1Q9BZJ3 242 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 PDFQ9HBH1 243 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 ZSCAN32Q9NX65 697 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 SLC25A13Q9UJS0 675 aa14.63□□□□□ -0.07
CBWD3-217ENST00000621474 SDK1Q7Z5N4 2213 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 CXorf51AA0A1B0GTR3 108 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 LRRD1A4D1F6 860 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 PALMO75781 387 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 CCDC175P0C221 793 aa14.62□□□□□ -0.07
CBWD3-217ENST00000621474 CTNNA1P35221 906 aaKnown RBP14.62□□□□□ -0.07
CBWD3-217ENST00000621474 SERPINH1P50454 418 aaKnown RBP14.62□□□□□ -0.07
CBWD3-217ENST00000621474 NAP1L1P55209 391 aaKnown RBP14.62□□□□□ -0.07
CBWD3-217ENST00000621474 SRSF5Q13243 272 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms