RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 USP2O75604 605 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 SPRP35270 261 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 KPNB1Q14974 876 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 KHDC1Q4VXA5 237 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 RAB6CQ53S08 254 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 NAPEPLDQ6IQ20 393 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 B3GALNT2Q8NCR0 500 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 BTN2A2Q8WVV5 523 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 DNAJC9Q8WXX5 260 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 NSL1Q96IY1 281 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 TWNKQ96RR1 684 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 WDR83Q9BRX9 315 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 B3GNT5Q9BYG0 378 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 RAB6CQ9H0N0 254 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 CRYL1Q9Y2S2 319 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 TRBV23OR9-2A0A075B6M9 112 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 C2orf81A6NN90 581 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 ENO4A6NNW6 628 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 MICAL2O94851 1124 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 FARP2O94887 1054 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 VAPBO95292 243 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 PARNO95453 639 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 HSPA8P11142 646 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 ARF4P18085 180 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 HLA-DPA1P20036 260 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 CYP2F1P24903 491 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 SERPINB4P48594 390 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC18A1P54219 525 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 MCCD1P59942 119 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 PRKCZQ05513 592 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 BST2Q10589 180 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 CSHL1Q14406 222 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 KCNA10Q16322 511 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 ZNF284Q2VY69 593 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 HSP90AA5PQ58FG0 334 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 PPP1R15BQ5SWA1 713 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 XYLT1Q86Y38 959 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 C7orf61Q8IZ16 206 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 CLIP3Q96DZ5 547 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 PCYT2Q99447 389 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 CADM1Q9BY67 442 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 NDOR1Q9UHB4 597 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 TCRBV5S1A1TA0A578 114 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 ANGPT2O15123 496 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 KRT36O76013 467 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 WFS1O76024 890 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 AMHP03971 560 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 HOXC6P09630 235 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 UBE3AQ05086 875 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 CES5AQ6NT32 575 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 MTHFD1LQ6UB35 978 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 DNAJC14Q6Y2X3 702 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 PRPF39Q86UA1 669 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 ALYREFQ86V81 257 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 PIGZQ86VD9 579 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 CHPFQ8IZ52 775 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 ING5Q8WYH8 240 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 TUBGCP3Q96CW5 907 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 APOPT1Q96IL0 206 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 ZBED3Q96IU2 234 aaPredicted RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 SERPINI1Q99574 410 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 MIPEPQ99797 713 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 BTBD10Q9BSF8 475 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 NIFKQ9BYG3 293 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 DCLRE1BQ9H816 532 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 MRPL17Q9NRX2 175 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 STOML1Q9UBI4 398 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 TRMT6Q9UJA5 497 aaKnown RBP8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 PCDHB8Q9UN66 801 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 PCDHGC3Q9UN70 934 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 FAM50BQ9Y247 325 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 NUMBLQ9Y6R0 609 aa8.43□□□□□ -1.06
PTPDC1-204ENST00000620992 COL4A5P29400 1685 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 ANKRD12Q6UB98 2062 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 MAFO75444 373 aaPredicted RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 CXCL14O95715 111 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 PYGLP06737 847 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 SLC2A3P11169 496 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 INHBEP58166 350 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 SMAD3P84022 425 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 CHI3L2Q15782 390 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 RAB42Q8N4Z0 105 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 TRIML2Q8N7C3 387 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 NIPA2Q8N8Q9 360 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 ARNTL2Q8WYA1 636 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 HAUS8Q9BT25 410 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 DMAP1Q9NPF5 467 aaPredicted RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 SCUBE2Q9NQ36 999 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 TRMT13Q9NUP7 481 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 MTO1Q9Y2Z2 717 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 B2RBV5 119 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 FCHO1O14526 889 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 TRUB2O95900 331 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 IL1BP01584 269 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 RBL1P28749 1068 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 STIP1P31948 543 aaKnown RBP8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 PGM1P36871 562 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 POLE2P56282 527 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 FSCBQ5H9T9 825 aa8.42□□□□□ -1.06
PTPDC1-204ENST00000620992 ZC3H12BQ5HYM0 836 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms