RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 PIGNO95427 931 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 CDK4P11802 303 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 SLC5A2P31639 672 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ATXN3P54252 364 aaPredicted RBP19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 FRG1Q14331 258 aaKnown RBP19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 PPP2R5DQ14738 602 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 PDK1Q15118 436 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 OLFML2BQ68BL8 750 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ZYG11AQ6WRX3 759 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ZNF410Q86VK4 478 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 TP53INP2Q8IXH6 220 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 TMEM151AQ8N4L1 468 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 C7orf31Q8N865 590 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 SPATA33Q96N06 139 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ACE2Q9BYF1 805 aaPredicted RBP19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 TMPRSS4Q9NRS4 437 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 TK2O00142 265 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 HCRTO43612 131 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 SBK3P0C264 359 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ADSLP30566 484 aaPredicted RBP19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 GRIA4P48058 902 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 HK2P52789 917 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 NR1H2P55055 460 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ARL13AQ5H913 290 aaPredicted RBP19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 LIPMQ5VYY2 423 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ARHGAP17Q68EM7 881 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 MICALL2Q8IY33 904 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 RNF139Q8WU17 664 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 FAM210AQ96ND0 272 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 CXCL16Q9H2A7 254 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ZBTB26Q9HCK0 441 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ZDHHC2Q9UIJ5 367 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 VANGL2Q9ULK5 521 aa19.94■□□□□ 0.78
PDLIM3-212ENST00000620787 ARHGAP10A1A4S6 786 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 TADA2AO75478 443 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 RNASEH2AO75792 299 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 JUNP05412 331 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 TFEBP19484 476 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 CSRP3P50461 194 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 IGBP1P78318 339 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 RFTN1Q14699 578 aaPredicted RBP19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 KLC3Q6P597 504 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 AMIGO2Q86SJ2 522 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 STON2Q8WXE9 905 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 IRGQQ8WZA9 623 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 MARK4Q96L34 752 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 IL22Q9GZX6 179 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 TIMMDC1Q9NPL8 285 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 CIDEBQ9UHD4 219 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 MID2Q9UJV3 735 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 CEPT1Q9Y6K0 416 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 RALGAPA2Q2PPJ7 1873 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 A0A1B0GTW7 788 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 CYP2C8P10632 490 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 RPL34P49207 117 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 POU5F1BQ06416 359 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 BST2Q10589 180 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 KYAT1Q16773 422 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 PID1Q7Z2X4 250 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 IFNLR1Q8IU57 520 aaPredicted RBP19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 COPS5Q92905 334 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 MFSD3Q96ES6 412 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 VPS39Q96JC1 886 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 C1QTNF1Q9BXJ1 281 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 R3HDMLQ9H3Y0 253 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 SMARCAD1Q9H4L7 1026 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 CNOT11Q9UKZ1 510 aaKnown RBP19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 CDYLQ9Y232 598 aa19.93■□□□□ 0.78
PDLIM3-212ENST00000620787 TIMM44O43615 452 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 AP2A1O95782 977 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 APOA4P06727 396 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 ADORA2BP29275 332 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 SLC26A2P50443 739 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 CSE1LP55060 971 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 PRKAA1Q13131 559 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 MPP3Q13368 585 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 TREML2Q5T2D2 321 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 NT5DC4Q86YG4 428 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 PSTKQ8IV42 348 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 CHERPQ8IWX8 916 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 RDH11Q8TC12 318 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 EFCAB1Q9HAE3 211 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 CASS4Q9NQ75 786 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 GMEB1Q9Y692 573 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 TANC1Q9C0D5 1861 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 H3BSA7 217 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 KCNK1O00180 336 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 VAPBO95292 243 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 ZNF26P17031 533 aaPredicted RBP19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 SULT1E1P49888 294 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 ART3Q13508 389 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 PAFAH1B3Q15102 231 aaKnown RBP19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 OTUD1Q5VV17 481 aaPredicted RBP19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 LSMEM2Q8N112 164 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 GAB3Q8WWW8 586 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 NLRP7Q8WX94 980 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 KLRG1Q96E93 195 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 TASP1Q9H6P5 420 aa19.92■□□□□ 0.78
PDLIM3-212ENST00000620787 BFARQ9NZS9 450 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms