RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 OLIG1Q8TAK6 271 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 FIBINQ8TAL6 211 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 SLC20A1Q8WUM9 679 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 RNF34Q969K3 372 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 NT5C3BQ969T7 300 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 FCRL3Q96P31 734 aaPredicted RBP6.24□□□□□ -1.41
SSX4B-202ENST00000619890 PPP1R9BQ96SB3 815 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 NPY6RQ99463 290 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 NUP58Q9BVL2 599 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 CIPCQ9C0C6 399 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 ELOVL2Q9NXB9 296 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 KCNK4Q9NYG8 393 aa6.24□□□□□ -1.41
SSX4B-202ENST00000619890 THAP10Q9P2Z0 257 aaPredicted RBP6.24□□□□□ -1.41
SSX4B-202ENST00000619890 UTP20O75691 2785 aaKnown RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SYNJ2BP-COX16A0A087WUM0 186 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 A0A1W2PQF6 199 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 A0A1W2PQJ5 194 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 LRRC53A6NM62 1247 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 TRIM24O15164 1050 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SH3BP5O60239 455 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SYNCRIPO60506 623 aaKnown RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 TSPAN3O60637 253 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 OPHN1O60890 802 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 CLDN11O75508 207 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 GRAP2O75791 330 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 DLDP09622 509 aaKnown RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 CHRNB2P17787 502 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 BCKDHBP21953 392 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SDC4P31431 198 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 HOXD12P35452 270 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 P2RY2P41231 377 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 IL12RB1P42701 662 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 PTPN9P43378 593 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 CCR10P46092 362 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 DHPSP49366 369 aaPredicted RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 CXCR3P49682 368 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SGSHP51688 502 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 ST8SIA6P61647 398 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 DEUP1Q05D60 604 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SULT2A1Q06520 285 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 NME3Q13232 169 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 ZNF234Q14588 700 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 TAF5Q15542 800 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 ASIC2Q16515 512 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 CLEC16AQ2KHT3 1053 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 ZC3H12AQ5D1E8 599 aaKnown RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 OTUD1Q5VV17 481 aaPredicted RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 RAP1GAP2Q684P5 730 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 RFWD3Q6PCD5 774 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SERPINA13PQ6UXR4 307 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SLC36A4Q6YBV0 504 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 MMS22LQ6ZRQ5 1243 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 MON1BQ7L1V2 547 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 STRADAQ7RTN6 431 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 GPR155Q7Z3F1 870 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 BNIPLQ7Z465 357 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 RABEPKQ7Z6M1 372 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 LUZP1Q86V48 1076 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 PGBD3Q8N328 593 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 C3orf20Q8ND61 904 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 HMGB4Q8WW32 186 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 CPA5Q8WXQ8 436 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 BAP1Q92560 729 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 TRIM11Q96F44 468 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 RPRD1AQ96P16 312 aaPredicted RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 PRMT1Q99873 361 aaKnown RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 AGPAT1Q99943 283 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 C11orf70Q9BRQ4 267 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 TPSD1Q9BZJ3 242 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 TTYH3Q9C0H2 523 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 RETREG1Q9H6L5 497 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 WDCPQ9H6R7 721 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 CBX8Q9HC52 389 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 CD248Q9HCU0 757 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 METTL5Q9NRN9 209 aaKnown RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 ABCB8Q9NUT2 735 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SEPT11Q9NVA2 429 aaKnown RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 ARHGEF38Q9NXL2 777 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 ADAM22Q9P0K1 906 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 COX16Q9P0S2 106 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 CALCOCO1Q9P1Z2 691 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 KIAA1522Q9P206 1035 aaPredicted RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 TMEM59LQ9UK28 342 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 PLA2G4CQ9UP65 541 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 SRPK3Q9UPE1 567 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 APOBEC2Q9Y235 224 aaKnown RBP6.23□□□□□ -1.41
SSX4B-202ENST00000619890 PCDHB9Q9Y5E1 797 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 STON1Q9Y6Q2 735 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 GON4LQ3T8J9 2241 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 ITIH6Q6UXX5 1313 aa6.23□□□□□ -1.41
SSX4B-202ENST00000619890 ATG2BQ96BY7 2078 aa6.22□□□□□ -1.41
SSX4B-202ENST00000619890 DOCK4Q8N1I0 1966 aa6.22□□□□□ -1.41
SSX4B-202ENST00000619890 GOLGA8SH3BPF8 625 aa6.22□□□□□ -1.41
SSX4B-202ENST00000619890 TEX33O43247 280 aa6.22□□□□□ -1.41
SSX4B-202ENST00000619890 AP5Z1O43299 807 aa6.22□□□□□ -1.41
SSX4B-202ENST00000619890 CBFA2T2O43439 604 aa6.22□□□□□ -1.41
SSX4B-202ENST00000619890 PAGE1O75459 146 aa6.22□□□□□ -1.41
SSX4B-202ENST00000619890 EPHX1P07099 455 aa6.22□□□□□ -1.41
SSX4B-202ENST00000619890 SRPRAP08240 638 aaKnown RBP6.22□□□□□ -1.41
SSX4B-202ENST00000619890 KRT3P12035 628 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms