RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 AGGF1Q8N302 714 aaeCLIP5.6□□□□□ -1.51
CBWD3-215ENST00000619322 PIGOQ8TEQ8 1089 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 FRS2Q8WU20 508 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 BTN2A2Q8WVV5 523 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 RSAD2Q8WXG1 361 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 SKA1Q96BD8 255 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 EDEM2Q9BV94 578 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 OSBPL2Q9H1P3 480 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 PLCB1Q9NQ66 1216 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 VPS18Q9P253 973 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 HOOK1Q9UJC3 728 aaKnown RBP5.6□□□□□ -1.51
CBWD3-215ENST00000619322 CENPFP49454 3210 aa5.6□□□□□ -1.51
CBWD3-215ENST00000619322 LNP1A1A4G5 178 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 LINC01387J3KSC0 135 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 HNRNPDLO14979 420 aaKnown RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 ADAM11O75078 769 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 STC2O76061 302 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 GFPT2O94808 682 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 MAP3K6O95382 1288 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 RPSAP08865 295 aaKnown RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 RALAP11233 206 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 H2AFXP16104 143 aaPredicted RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 MCM7P33993 719 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 TNFSF9P41273 254 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 UBASH3AP57075 661 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 SLC39A12Q504Y0 691 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 SPECC1LQ69YQ0 1117 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 FAM117BQ6P1L5 589 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 ZNF662Q6ZS27 426 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 TMC6Q7Z403 805 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 SCD5Q86SK9 330 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 SH3RF2Q8TEC5 729 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 SAP25Q8TEE9 199 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 AUTS2Q8WXX7 1259 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 FCRL2Q96LA5 508 aaPredicted RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 FNBP1Q96RU3 617 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 MMS19Q96T76 1030 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 CORO1BQ9BR76 489 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 DUSP23Q9BVJ7 150 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 EDEM3Q9BZQ6 932 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 TTYH3Q9C0H2 523 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 RAPGEFL1Q9UHV5 662 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 APPL1Q9UKG1 709 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 DGKBQ9Y6T7 804 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 ZSCAN5CA6NGD5 496 aaPredicted RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 ARHGAP6O43182 974 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 NDUFB5O43674 189 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 KLHL41O60662 606 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 DUSP3P51452 185 aaPredicted RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 RPS14P62263 151 aaKnown RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 KCNMA1Q12791 1236 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 TBC1D25Q3MII6 688 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 HSP90AA4PQ58FG1 418 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 FAM26FQ5R3K3 315 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 ZNF658Q5TYW1 1059 aaPredicted RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 RRAGBQ5VZM2 374 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 WSCD1Q658N2 575 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 LRRC49Q8IUZ0 686 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 TSTD1Q8NFU3 115 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 ZNF599Q96NL3 588 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 SERPINB11Q96P15 392 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 DDA1Q9BW61 102 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 ACE2Q9BYF1 805 aaPredicted RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 RBM12Q9NTZ6 932 aaKnown RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 MTUS1Q9ULD2 1270 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 PRG3Q9Y2Y8 225 aaPredicted RBP5.59□□□□□ -1.51
CBWD3-215ENST00000619322 PCDHGA6Q9Y5G7 932 aa5.59□□□□□ -1.51
CBWD3-215ENST00000619322 A0A1W2PPC4 97 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 SRRM3A6NNA2 597 aaPredicted RBP5.59□□□□□ -1.52
CBWD3-215ENST00000619322 F8W810 466 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 PCDH17O14917 1159 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 GOSR1O95249 250 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 HOXD9P28356 352 aaPredicted RBP5.59□□□□□ -1.52
CBWD3-215ENST00000619322 AVPR1AP37288 418 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 UBA7P41226 1012 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 TPM4P67936 248 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 BFSP1Q12934 665 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 ZNF776Q68DI1 518 aaPredicted RBP5.59□□□□□ -1.52
CBWD3-215ENST00000619322 NXPE4Q6UWF7 544 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 ADIPOR2Q86V24 386 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 CCDC74AQ96AQ1 378 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 NAA15Q9BXJ9 866 aaKnown RBP5.59□□□□□ -1.52
CBWD3-215ENST00000619322 RBCK1Q9BYM8 510 aa5.59□□□□□ -1.52
CBWD3-215ENST00000619322 H3BQF6 201 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 RGS9O75916 674 aaPredicted RBP5.58□□□□□ -1.52
CBWD3-215ENST00000619322 PTPN9P43378 593 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 ZXDBP98169 803 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 DUSP4Q13115 394 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 HNRNPA1L2Q32P51 320 aaKnown RBP5.58□□□□□ -1.52
CBWD3-215ENST00000619322 MED25Q71SY5 747 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 TICAM1Q8IUC6 712 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 KIAA0895Q8NCT3 520 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 PRR11Q96HE9 360 aaPredicted RBP5.58□□□□□ -1.52
CBWD3-215ENST00000619322 VCPIP1Q96JH7 1222 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 SRPK1Q96SB4 655 aaKnown RBP5.58□□□□□ -1.52
CBWD3-215ENST00000619322 ZPBPQ9BS86 351 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 SPRY4Q9C004 299 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 YY1AP1Q9H869 796 aa5.58□□□□□ -1.52
CBWD3-215ENST00000619322 DONSONQ9NYP3 566 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms