RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 AIF1LQ9BQI0 150 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 HERC2P3Q9BVR0 1158 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 OR2B2Q9GZK3 357 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 TREM1Q9NP99 234 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 GPR108Q9NPR9 543 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 NAGPAQ9UK23 515 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 FARSAQ9Y285 508 aaKnown RBP15.25■□□□□ 0.03
COL5A1-208ENST00000618395 CAPN6Q9Y6Q1 641 aa15.25■□□□□ 0.03
COL5A1-208ENST00000618395 FADS2O95864 444 aaKnown RBP15.24■□□□□ 0.03
COL5A1-208ENST00000618395 PTPN5P54829 565 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ILF2Q12905 390 aaKnown RBP15.24■□□□□ 0.03
COL5A1-208ENST00000618395 CCDC86Q9H6F5 360 aaKnown RBP15.24■□□□□ 0.03
COL5A1-208ENST00000618395 CATSPERBQ9H7T0 1116 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 MAU2Q9Y6X3 613 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ATMINO43313 823 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ZNF24P17028 368 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 TWF1Q12792 350 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ADCY4Q8NFM4 1077 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 RHOBTB3O94955 611 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 NR2F6P10588 404 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 DRD4P21917 467 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ZNF517Q6ZMY9 492 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-208ENST00000618395 EYA1Q99502 592 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 GANQ9H2C0 597 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 PDGFCQ9NRA1 345 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 CST1P01037 141 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 MAB21L1Q13394 359 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 TPK1Q9H3S4 243 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 COPRSQ9NQ92 184 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 TRPC4Q9UBN4 977 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 PRKAG3Q9UGI9 489 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 RGS14O43566 566 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ERVK-24P63145 666 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 SLC25A3Q00325 362 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 MYO1HQ8N1T3 1032 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ALDH8A1Q9H2A2 487 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-208ENST00000618395 CHURC1-FNTBB4DL54 471 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 SLC16A4O15374 487 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 AP5Z1O43299 807 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 PLEKHA8P1O95397 391 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 IFNA6P05013 189 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 EPB42P16452 691 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 NFKB1P19838 968 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ETFBP38117 255 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 CDKL1Q00532 357 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 FAM153CQ494X1 144 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 GRTP1Q5TC63 336 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 OGFRL1Q5TC84 451 aaPredicted RBP15.24■□□□□ 0.03
COL5A1-208ENST00000618395 LHFPL3Q86UP9 236 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 VPS35Q96QK1 796 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 CXorf21Q9HAI6 301 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 ZNF304Q9HCX3 659 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 STK32BQ9NY57 414 aa15.24■□□□□ 0.03
COL5A1-208ENST00000618395 AAR2Q9Y312 384 aaKnown RBP15.24■□□□□ 0.03
COL5A1-208ENST00000618395 A0A0A6YYK5 440 aaPredicted RBP15.23■□□□□ 0.03
COL5A1-208ENST00000618395 CRYZL1O95825 349 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 HPGDP15428 266 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 FAM187BQ17R55 369 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 SYDE2Q5VT97 1194 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 SEPT12Q8IYM1 358 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 HELQQ8TDG4 1101 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 SLC52A2Q9HAB3 445 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 PADI2Q9Y2J8 665 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 H0Y858 1186 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 PLD2O14939 933 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 GDF11O95390 407 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 POMGNT2Q8NAT1 580 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 MRPL9Q9BYD2 267 aaKnown RBP15.23■□□□□ 0.03
COL5A1-208ENST00000618395 IFRD1O00458 451 aaPredicted RBP15.23■□□□□ 0.03
COL5A1-208ENST00000618395 TBX1O43435 398 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 SNRPB2P08579 225 aaKnown RBP15.23■□□□□ 0.03
COL5A1-208ENST00000618395 ARMC6Q6NXE6 501 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 OR52L1Q8NGH7 329 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 BTBD9Q96Q07 612 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 S100A14Q9HCY8 104 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 PRDM8Q9NQV8 689 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 PSMD13Q9UNM6 376 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 UGT2B11O75310 529 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 PLEKP08567 350 aaPredicted RBP15.23■□□□□ 0.03
COL5A1-208ENST00000618395 SSX2Q16385 188 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 STYK1Q6J9G0 422 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 STARD8Q92502 1023 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 TMEM216Q9P0N5 145 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 TSTD3H0UI37 97 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 GPD2P43304 727 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 AP5M1Q9H0R1 490 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 EVPLQ92817 2033 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 C2orf81A6NN90 581 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 KYAT1Q16773 422 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 IL31Q6EBC2 164 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 ERAP2Q6P179 960 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 PABPC5Q96DU9 382 aaKnown RBP15.23■□□□□ 0.03
COL5A1-208ENST00000618395 CYTH4Q9UIA0 394 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 TUBE1Q9UJT0 475 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 SPACA6W5XKT8 324 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 LRRC14BA6NHZ5 514 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 CD40LGP29965 261 aa15.23■□□□□ 0.03
COL5A1-208ENST00000618395 GSCP56915 257 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms