RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 MBLAC2Q68D91 279 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 ZNF776Q68DI1 518 aaPredicted RBP8.84□□□□□ -0.99
GPC6-202ENST00000617456 NCEH1Q6PIU2 408 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 CCDC80Q76M96 950 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 UNC45BQ8IWX7 931 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 EHBP1Q8NDI1 1231 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 ZNF397Q8NF99 534 aaPredicted RBP8.84□□□□□ -0.99
GPC6-202ENST00000617456 LMO3Q8TAP4 145 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 NDRG1Q92597 394 aaKnown RBP8.84□□□□□ -0.99
GPC6-202ENST00000617456 EEF2KMTQ96G04 330 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 NAF1Q96HR8 494 aaKnown RBP8.84□□□□□ -0.99
GPC6-202ENST00000617456 RSPH9Q9H1X1 276 aaPredicted RBP8.84□□□□□ -0.99
GPC6-202ENST00000617456 MMRN2Q9H8L6 949 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 FBXL12Q9NXK8 326 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 GGA2Q9UJY4 613 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 MAN1B1Q9UKM7 699 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 HECTD1Q9ULT8 2610 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 NCKAP1Q9Y2A7 1128 aa8.84□□□□□ -0.99
GPC6-202ENST00000617456 A0A1W2PP55 124 aa8.83□□□□□ -1
GPC6-202ENST00000617456 A0A1W2PPC4 97 aa8.83□□□□□ -1
GPC6-202ENST00000617456 GTPBP10A4D1E9 387 aaKnown RBP8.83□□□□□ -1
GPC6-202ENST00000617456 PYCARD-AS1I3L0S3 204 aa8.83□□□□□ -1
GPC6-202ENST00000617456 WNT9AO14904 365 aa8.83□□□□□ -1
GPC6-202ENST00000617456 PAPSS1O43252 624 aaPredicted RBP8.83□□□□□ -1
GPC6-202ENST00000617456 ATP8B1O43520 1251 aa8.83□□□□□ -1
GPC6-202ENST00000617456 E2F6O75461 281 aa8.83□□□□□ -1
GPC6-202ENST00000617456 C1SP09871 688 aa8.83□□□□□ -1
GPC6-202ENST00000617456 CD44P16070 742 aaKnown RBP8.83□□□□□ -1
GPC6-202ENST00000617456 BMP6P22004 513 aa8.83□□□□□ -1
GPC6-202ENST00000617456 ACADSBP45954 432 aa8.83□□□□□ -1
GPC6-202ENST00000617456 SGSHP51688 502 aa8.83□□□□□ -1
GPC6-202ENST00000617456 GALCP54803 685 aa8.83□□□□□ -1
GPC6-202ENST00000617456 CORO7P57737 925 aa8.83□□□□□ -1
GPC6-202ENST00000617456 UBE2HP62256 183 aa8.83□□□□□ -1
GPC6-202ENST00000617456 ZBTB16Q05516 673 aa8.83□□□□□ -1
GPC6-202ENST00000617456 KCNH2Q12809 1159 aa8.83□□□□□ -1
GPC6-202ENST00000617456 BNIP3Q12983 259 aa8.83□□□□□ -1
GPC6-202ENST00000617456 PAK1Q13153 545 aa8.83□□□□□ -1
GPC6-202ENST00000617456 KRT72Q14CN4 511 aa8.83□□□□□ -1
GPC6-202ENST00000617456 CCDC40Q4G0X9 1142 aa8.83□□□□□ -1
GPC6-202ENST00000617456 ADGRF1Q5T601 910 aa8.83□□□□□ -1
GPC6-202ENST00000617456 BSPRYQ5W0U4 402 aa8.83□□□□□ -1
GPC6-202ENST00000617456 NUGGCQ68CJ6 796 aa8.83□□□□□ -1
GPC6-202ENST00000617456 MSANTD2Q6P1R3 559 aa8.83□□□□□ -1
GPC6-202ENST00000617456 FBXL19Q6PCT2 694 aa8.83□□□□□ -1
GPC6-202ENST00000617456 BHLHA9Q7RTU4 235 aa8.83□□□□□ -1
GPC6-202ENST00000617456 ADIPOR2Q86V24 386 aa8.83□□□□□ -1
GPC6-202ENST00000617456 TRIM42Q8IWZ5 723 aa8.83□□□□□ -1
GPC6-202ENST00000617456 SPACA3Q8IXA5 215 aa8.83□□□□□ -1
GPC6-202ENST00000617456 AHI1Q8N157 1196 aa8.83□□□□□ -1
GPC6-202ENST00000617456 SIX6OS1Q8N1H7 587 aa8.83□□□□□ -1
GPC6-202ENST00000617456 SNIP1Q8TAD8 396 aaKnown RBP8.83□□□□□ -1
GPC6-202ENST00000617456 SAP25Q8TEE9 199 aa8.83□□□□□ -1
GPC6-202ENST00000617456 RNF139Q8WU17 664 aa8.83□□□□□ -1
GPC6-202ENST00000617456 NELFBQ8WX92 580 aa8.83□□□□□ -1
GPC6-202ENST00000617456 GOLGA1Q92805 767 aa8.83□□□□□ -1
GPC6-202ENST00000617456 FGF11Q92914 225 aa8.83□□□□□ -1
GPC6-202ENST00000617456 SKA1Q96BD8 255 aa8.83□□□□□ -1
GPC6-202ENST00000617456 TMA16Q96EY4 203 aaKnown RBP8.83□□□□□ -1
GPC6-202ENST00000617456 NRSN2Q9GZP1 204 aa8.83□□□□□ -1
GPC6-202ENST00000617456 FAM107BQ9H098 131 aa8.83□□□□□ -1
GPC6-202ENST00000617456 PABPC3Q9H361 631 aaKnown RBP8.83□□□□□ -1
GPC6-202ENST00000617456 FBRSQ9HAH7 460 aa8.83□□□□□ -1
GPC6-202ENST00000617456 EBF2Q9HAK2 575 aa8.83□□□□□ -1
GPC6-202ENST00000617456 GDF3Q9NR23 364 aa8.83□□□□□ -1
GPC6-202ENST00000617456 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
GPC6-202ENST00000617456 SERGEFQ9UGK8 458 aa8.83□□□□□ -1
GPC6-202ENST00000617456 SFMBT1Q9UHJ3 866 aa8.83□□□□□ -1
GPC6-202ENST00000617456 RWDD2AQ9UIY3 292 aa8.83□□□□□ -1
GPC6-202ENST00000617456 MUC22E2RYF6 1773 aaPredicted RBP8.83□□□□□ -1
GPC6-202ENST00000617456 COL6A6A6NMZ7 2263 aa8.83□□□□□ -1
GPC6-202ENST00000617456 TEX51A0A1B0GUA7 166 aa8.82□□□□□ -1
GPC6-202ENST00000617456 TRIM49BA6NDI0 452 aa8.82□□□□□ -1
GPC6-202ENST00000617456 ERICH4A6NGS2 130 aa8.82□□□□□ -1
GPC6-202ENST00000617456 LRRC72A6NJI9 287 aa8.82□□□□□ -1
GPC6-202ENST00000617456 MID1O15344 667 aa8.82□□□□□ -1
GPC6-202ENST00000617456 MED7O43513 233 aa8.82□□□□□ -1
GPC6-202ENST00000617456 TBL1XO60907 577 aa8.82□□□□□ -1
GPC6-202ENST00000617456 RNASEH1O60930 286 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 PEX14O75381 377 aa8.82□□□□□ -1
GPC6-202ENST00000617456 RNASEH2AO75792 299 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 AFPP02771 609 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 ATP5BP06576 529 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 DLDP09622 509 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 CDK4P11802 303 aa8.82□□□□□ -1
GPC6-202ENST00000617456 CD19P15391 556 aa8.82□□□□□ -1
GPC6-202ENST00000617456 POLR2EP19388 210 aaKnown RBP8.82□□□□□ -1
GPC6-202ENST00000617456 GLDCP23378 1020 aa8.82□□□□□ -1
GPC6-202ENST00000617456 CD38P28907 300 aa8.82□□□□□ -1
GPC6-202ENST00000617456 CD70P32970 193 aa8.82□□□□□ -1
GPC6-202ENST00000617456 ACTN2P35609 894 aa8.82□□□□□ -1
GPC6-202ENST00000617456 DAOAP59103 153 aa8.82□□□□□ -1
GPC6-202ENST00000617456 TLE3Q04726 772 aa8.82□□□□□ -1
GPC6-202ENST00000617456 RTP5Q14D33 572 aa8.82□□□□□ -1
GPC6-202ENST00000617456 GOLGA7BQ2TAP0 167 aa8.82□□□□□ -1
GPC6-202ENST00000617456 C4orf46Q504U0 113 aa8.82□□□□□ -1
GPC6-202ENST00000617456 RFWD3Q6PCD5 774 aa8.82□□□□□ -1
GPC6-202ENST00000617456 TMEM270Q6UE05 265 aa8.82□□□□□ -1
GPC6-202ENST00000617456 PCSK4Q6UW60 755 aa8.82□□□□□ -1
GPC6-202ENST00000617456 KDM7AQ6ZMT4 941 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms