RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CCINQ13939 588 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 EIF4HQ15056 248 aaKnown RBP15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 FBXO43Q4G163 708 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 DGKKQ5KSL6 1271 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 SLC13A5Q86YT5 568 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 DCAF4L2Q8NA75 395 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 HAUS1Q96CS2 278 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 OSBPL9Q96SU4 736 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 C2orf49Q9BVC5 232 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 COL25A1Q9BXS0 654 aaPredicted RBP15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 ZDHHC4Q9NPG8 344 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 IPO11Q9UI26 975 aaKnown RBP15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 ERVW-1Q9UQF0 538 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 STARD13Q9Y3M8 1113 aa15.97■□□□□ 0.15
PCDHGC3-204ENST00000617222 TCRBV7S2A1N4TA0A589 114 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 J3KR12 359 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 TNFRSF10AO00220 468 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 ASLP04424 464 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 KIR2DL1P43626 348 aaPredicted RBP15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 NR2C2P49116 596 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 ARF5P84085 180 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 FZD5Q13467 585 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 LRRC32Q14392 662 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 C2orf27AQ580R0 203 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 PAPD7Q5XG87 772 aaKnown RBP15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 EGFLAMQ63HQ2 1017 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 LINGO4Q6UY18 593 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 LEKR1Q6ZMV7 388 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 ADAT2Q7Z6V5 191 aaKnown RBP15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 COG1Q8WTW3 980 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 LRRN4Q8WUT4 740 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 P3H4Q92791 437 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 ACDQ96AP0 544 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 RPL10LQ96L21 214 aaKnown RBP15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 EPHX3Q9H6B9 360 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 THAP10Q9P2Z0 257 aaPredicted RBP15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 SLC25A13Q9UJS0 675 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 PLA2G4CQ9UP65 541 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 ACTL7AQ9Y615 435 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 TTC28Q96AY4 2481 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 DOCK4Q8N1I0 1966 aa15.96■□□□□ 0.15
PCDHGC3-204ENST00000617222 ZNF185O15231 689 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 NCAM2O15394 837 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 PRAMEF11O60813 436 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 RNF40O75150 1001 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 MT-CO1P00395 513 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 FGGP02679 453 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 PRLRP16471 622 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 TCP1P17987 556 aaKnown RBP15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 MX2P20592 715 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 GARSP41250 739 aaKnown RBP15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 WASP42768 502 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 STK19P49842 368 aaPredicted RBP15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 MRPS21P82921 87 aaKnown RBP15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 GALNT2Q10471 571 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 KLF1Q13351 362 aaPredicted RBP15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 ZNF234Q14588 700 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 PTPRNQ16849 979 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 RETSATQ6NUM9 610 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 B4GALNT4Q76KP1 1039 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 BZW1Q7L1Q6 419 aaKnown RBP15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 LRRC49Q8IUZ0 686 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 ATPAF2Q8N5M1 289 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 ZNF513Q8N8E2 541 aaPredicted RBP15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 CCNYQ8ND76 341 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 PJA1Q8NG27 643 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 CCDC26Q8TAB7 109 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 ACTL9Q8TC94 416 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 KCNV2Q8TDN2 545 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 USP33Q8TEY7 942 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 MS4A14Q96JA4 679 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 MRGPRX3Q96LB0 322 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 ACOX2Q99424 681 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 OSBPL6Q9BZF3 934 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 SP110Q9HB58 689 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 SLCO3A1Q9UIG8 710 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 SIT1Q9Y3P8 196 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 RAD54BQ9Y620 910 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 SAR1BQ9Y6B6 198 aa15.95■□□□□ 0.14
PCDHGC3-204ENST00000617222 APOC4-APOC2K7ER74 178 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 MAFKO60675 156 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 KLF8O95600 359 aaPredicted RBP15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 APOC2P02655 101 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 SRPRAP08240 638 aaKnown RBP15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 CHRM1P11229 460 aaPredicted RBP15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 HNRNPLP14866 589 aaKnown RBP eCLIP15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 NNMTP40261 264 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 ST8SIA6P61647 398 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 OTUD4Q01804 1114 aaKnown RBP15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 IL10RBQ08334 325 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 SLC20A2Q08357 652 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 PDK1Q15118 436 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 LONRF2Q1L5Z9 754 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 FNDC3BQ53EP0 1204 aaKnown RBP15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 Q6ZS52 159 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 CCDC105Q8IYK2 499 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 SYNPOQ8N3V7 929 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 RASGEF1CQ8N431 466 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 ALLCQ8N6M5 410 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 ATP11CQ8NB49 1132 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms