RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CSE1LP55060 971 aaKnown RBP16.03■□□□□ 0.16
NR1H3-235ENST00000616973 TBX4P57082 545 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 USP46P62068 366 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 PDE1BQ01064 536 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 ELAVL2Q12926 359 aaKnown RBP16.03■□□□□ 0.16
NR1H3-235ENST00000616973 GPR17Q13304 367 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 PDE1CQ14123 709 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-235ENST00000616973 TEDDM1Q5T9Z0 273 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 PIK3R6Q5UE93 754 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 ARMC3Q5W041 872 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 OTOP3Q7RTS5 596 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 C14orf80Q86SX3 495 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 TBC1D1Q86TI0 1168 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-235ENST00000616973 PARP9Q8IXQ6 854 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 SPPL2BQ8TCT7 592 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 SPATA17Q96L03 361 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 TMEM175Q9BSA9 504 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 GPR62Q9BZJ7 368 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 PRDM5Q9NQX1 630 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-235ENST00000616973 SAR1AQ9NR31 198 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 DONSONQ9NYP3 566 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 GMIPQ9P107 970 aa16.03■□□□□ 0.16
NR1H3-235ENST00000616973 PPARGC1AQ9UBK2 798 aaKnown RBP16.03■□□□□ 0.16
NR1H3-235ENST00000616973 SCN5AQ14524 2016 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 ATP9BO43861 1147 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 TBC1D4O60343 1298 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 DNAJC6O75061 913 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 RHOQP17081 205 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 NDST2P52849 883 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 ARFIP2P53365 341 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 LIMK2P53671 638 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 TMPRSS15P98073 1019 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 OCRLQ01968 901 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 BST1Q10588 318 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 RIPK1Q13546 671 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 ANO4Q32M45 955 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 ACBD5Q5T8D3 534 aaPredicted RBP16.02■□□□□ 0.16
NR1H3-235ENST00000616973 CEP57Q86XR8 500 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 SUGP1Q8IWZ8 645 aaKnown RBP16.02■□□□□ 0.16
NR1H3-235ENST00000616973 CRIPAKQ8N1N5 446 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 UMODL1-AS1Q8N2C9 162 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 ATAD1Q8NBU5 361 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 USP33Q8TEY7 942 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 TBL1YQ9BQ87 522 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 MECRQ9BV79 373 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 NDFIP2Q9NV92 336 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 NSMCE4AQ9NXX6 385 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 EMCNQ9ULC0 261 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 DNAH12Q6ZR08 3092 aa16.02■□□□□ 0.16
NR1H3-235ENST00000616973 TET1Q8NFU7 2136 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 IGLV3-10A0A075B6K4 115 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 SNNO75324 88 aaPredicted RBP16.02■□□□□ 0.15
NR1H3-235ENST00000616973 MOCS2O96007 188 aaPredicted RBP16.02■□□□□ 0.15
NR1H3-235ENST00000616973 GSRP00390 522 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 SLC11A1P49279 550 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 TRIP4Q15650 581 aaPredicted RBP16.02■□□□□ 0.15
NR1H3-235ENST00000616973 CHI3L2Q15782 390 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 KCNMB4Q86W47 210 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 ATP6V0D2Q8N8Y2 350 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 C2orf15Q8WU43 125 aaKnown RBP16.02■□□□□ 0.15
NR1H3-235ENST00000616973 INPP5DQ92835 1189 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 MFSD3Q96ES6 412 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 PGLYRP2Q96PD5 576 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 MCMBPQ9BTE3 642 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 MRPL9Q9BYD2 267 aaKnown RBP16.02■□□□□ 0.15
NR1H3-235ENST00000616973 LRMDAQ9H2I8 198 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 TLR8Q9NR97 1041 aaKnown RBP16.02■□□□□ 0.15
NR1H3-235ENST00000616973 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.02■□□□□ 0.15
NR1H3-235ENST00000616973 ZFP69BQ9UJL9 534 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 DCTN4Q9UJW0 460 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 LRFN2Q9ULH4 789 aa16.02■□□□□ 0.15
NR1H3-235ENST00000616973 MTMR11A4FU01 709 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 H7C4K7 107 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 HGSO14964 777 aaPredicted RBP16.01■□□□□ 0.15
NR1H3-235ENST00000616973 PLIN3O60664 434 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 HNRNPCL1O60812 293 aaKnown RBP16.01■□□□□ 0.15
NR1H3-235ENST00000616973 TYK2P29597 1187 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 ADRA1AP35348 466 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 MAP2K2P36507 400 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 SERPINB8P50452 374 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 PAPOLAP51003 745 aaKnown RBP16.01■□□□□ 0.15
NR1H3-235ENST00000616973 KCNJ2P63252 427 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 MS4A13Q5J8X5 152 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 PCID2Q5JVF3 399 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 N4BP2L1Q5TBK1 243 aaPredicted RBP16.01■□□□□ 0.15
NR1H3-235ENST00000616973 PDPK2PQ6A1A2 396 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 FUT10Q6P4F1 479 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 STRA8Q7Z7C7 330 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 NPAS4Q8IUM7 802 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 TTC9BQ8N6N2 239 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 PTCD2Q8WV60 388 aaKnown RBP16.01■□□□□ 0.15
NR1H3-235ENST00000616973 FBXO32Q969P5 355 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 BTN2A3PQ96KV6 586 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 APOL2Q9BQE5 337 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 TMEM120AQ9BXJ8 343 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 NOL6Q9H6R4 1146 aaKnown RBP16.01■□□□□ 0.15
NR1H3-235ENST00000616973 ENTPD7Q9NQZ7 604 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 CHRAC1Q9NRG0 131 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 TMEM248Q9NWD8 314 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms