RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CDC42P60953 191 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 SKIV2LQ15477 1246 aaKnown RBP13.96□□□□□ -0.17
CHD1-212ENST00000614616 ZNF423Q2M1K9 1284 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 KCNMB4Q86W47 210 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 SLC44A2Q8IWA5 706 aaPredicted RBP13.96□□□□□ -0.17
CHD1-212ENST00000614616 MED11Q9P086 117 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 LRIG2O94898 1065 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 S100A2P29034 98 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 PRDX6P30041 224 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 NPY2RP49146 381 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 BMPR2Q13873 1038 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 SPPL2AQ8TCT8 520 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.176e-7■■■■□ 23.1
CHD1-212ENST00000614616 BCS1LQ9Y276 419 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 IRAK3Q9Y616 596 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 RGS10O43665 173 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 ECE2O60344 883 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 USP12O75317 370 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 ANO7Q6IWH7 933 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 ACSF2Q96CM8 615 aaPredicted RBP13.96□□□□□ -0.17
CHD1-212ENST00000614616 CAMKK2Q96RR4 588 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 APOL5Q9BWW9 433 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 TTLL9Q3SXZ7 439 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 PLA2G4FQ68DD2 849 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 PGBD2Q6P3X8 592 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 KBTBD7Q8WVZ9 684 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 NT5C1AQ9BXI3 368 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 TTYH1Q9H313 450 aaPredicted RBP13.96□□□□□ -0.17
CHD1-212ENST00000614616 EFCAB6Q5THR3 1501 aa13.96□□□□□ -0.17
CHD1-212ENST00000614616 IRGMA1A4Y4 181 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 GRAP2O75791 330 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 ABI1Q8IZP0 508 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 GPRASP2Q96D09 838 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 MBOAT7Q96N66 472 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 SMPD3Q9NY59 655 aaPredicted RBP13.96□□□□□ -0.18
CHD1-212ENST00000614616 FEM1BQ9UK73 627 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 I3L521 148 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 DDX3YO15523 660 aaKnown RBP13.96□□□□□ -0.18
CHD1-212ENST00000614616 MED22Q15528 200 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 WDR72Q3MJ13 1102 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 CYP2U1Q7Z449 544 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 ELMOD2Q8IZ81 293 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 OR2T34Q8NGX1 318 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 OR2T3Q8NH03 318 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 SLC5A5Q92911 643 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 PHF21BQ96EK2 531 aa13.96□□□□□ -0.18
CHD1-212ENST00000614616 DCP1AQ9NPI6 582 aaPredicted RBP13.96□□□□□ -0.18
CHD1-212ENST00000614616 CUEDC1Q9NWM3 386 aaPredicted RBP13.96□□□□□ -0.18
CHD1-212ENST00000614616 RGS17Q9UGC6 210 aaPredicted RBP13.96□□□□□ -0.18
CHD1-212ENST00000614616 C2orf81A6NN90 581 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 NCAM2O15394 837 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 ZMPSTE24O75844 475 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 HLA-DRAP01903 254 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 CDK9P50750 372 aaKnown RBP13.95□□□□□ -0.18
CHD1-212ENST00000614616 EPHA7Q15375 998 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 ZBED5Q49AG3 693 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 PPM1LQ5SGD2 360 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 OLFML2AQ68BL7 652 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 ZNF549Q6P9A3 640 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 DAGLBQ8NCG7 672 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 SLC47A1Q96FL8 570 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 IGSF9Q9P2J2 1179 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 MGAT4DA6NG13 374 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 UGT2B4P06133 528 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 PPP2R1BP30154 601 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 DCAF6Q58WW2 860 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 LRRC19Q9H756 370 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 TOR4AQ9NXH8 423 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 A0A096LPK6 155 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 ILVBLA1L0T0 632 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 CYP2C8P10632 490 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 C1QBPQ07021 282 aaKnown RBP13.95□□□□□ -0.18
CHD1-212ENST00000614616 OCLNQ16625 522 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 NADK2Q4G0N4 442 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 HOPXQ9BPY8 73 aaPredicted RBP13.95□□□□□ -0.18
CHD1-212ENST00000614616 FADS2O95864 444 aaKnown RBP13.95□□□□□ -0.18
CHD1-212ENST00000614616 ADGRE1Q14246 886 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 CARTPTQ16568 116 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 CNSTQ6PJW8 725 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 KATNAL2Q8IYT4 538 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 FBXL16Q8N461 479 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 STARD8Q92502 1023 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 DMRTB1Q96MA1 342 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 MYL9P24844 172 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 PSMA1P25786 263 aaKnown RBP13.95□□□□□ -0.18
CHD1-212ENST00000614616 ACOT2P49753 483 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 AP3S2P59780 193 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 FAM187BQ17R55 369 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 LIPMQ5VYY2 423 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 PCDH20Q8N6Y1 951 aaKnown RBP13.95□□□□□ -0.18
CHD1-212ENST00000614616 GIT1Q9Y2X7 761 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 ASTN2O75129 1339 aaPredicted RBP13.95□□□□□ -0.18
CHD1-212ENST00000614616 PGK1P00558 417 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 CCNIQ14094 377 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 POTEHQ6S545 545 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 REXO5Q96IC2 774 aaKnown RBP13.95□□□□□ -0.18
CHD1-212ENST00000614616 CINPQ9BW66 212 aaPredicted RBP13.95□□□□□ -0.18
CHD1-212ENST00000614616 POMKQ9H5K3 350 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 AASDHPPTQ9NRN7 309 aa13.95□□□□□ -0.18
CHD1-212ENST00000614616 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.95□□□□□ -0.184e-7■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms