RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 RPRD1AQ96P16 312 aaPredicted RBP11.73□□□□□ -0.53
SLIRP-212ENST00000613856 QKIQ96PU8 341 aaKnown RBP eCLIP11.73□□□□□ -0.53
SLIRP-212ENST00000613856 LRRC1Q9BTT6 524 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 KLC2Q9H0B6 622 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 TDP1Q9NUW8 608 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 GDE1Q9NZC3 331 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 AMACRQ9UHK6 382 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 MFHAS1Q9Y4C4 1052 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 HEY1Q9Y5J3 304 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 ASPMQ8IZT6 3477 aa11.73□□□□□ -0.53
SLIRP-212ENST00000613856 GOLGA6L7A0A1B0GV03 622 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 BCLAF3A2AJT9 711 aaKnown RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 PRR5-ARHGAP8B1AHC4 643 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 BHMG1C9JSJ3 638 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 PPP1R12AO14974 1030 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 GAS8O95995 478 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 RBP3P10745 1247 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 MX2P20592 715 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 IRAK1P51617 712 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 ARHGAP8P85298 464 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 PRKCQQ04759 706 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 ZNF33AQ06730 810 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 GALNT2Q10471 571 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 SLC10A2Q12908 348 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 SNX1Q13596 522 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 PTK6Q13882 451 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 COL9A2Q14055 689 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 PRKD1Q15139 912 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 ERCC6LQ2NKX8 1250 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 SLC45A4Q5BKX6 768 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 RNF43Q68DV7 783 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 JAMLQ86YT9 394 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 ARHGAP12Q8IWW6 846 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 UMODL1-AS1Q8N2C9 162 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 ALLCQ8N6M5 410 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 GPR161Q8N6U8 529 aaKnown RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 HJURPQ8NCD3 748 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 HDAC11Q96DB2 347 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 RTP4Q96DX8 246 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 FAM118BQ9BPY3 351 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 ANKZF1Q9H8Y5 726 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 TRPV4Q9HBA0 871 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 OBP2AQ9NY56 170 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 SAE1Q9UBE0 346 aaPredicted RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 NDRG2Q9UN36 371 aaKnown RBP11.72□□□□□ -0.53
SLIRP-212ENST00000613856 CCL26Q9Y258 94 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 F5P12259 2224 aa11.72□□□□□ -0.53
SLIRP-212ENST00000613856 SDK1Q7Z5N4 2213 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 A0A1B0GVM2 712 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 TCAF2A6NFQ2 919 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 H7C0C1 242 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 SLC30A4O14863 429 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 TTI1O43156 1089 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 CLDN11O75508 207 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 CNTN5O94779 1100 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 HEXIM1O94992 359 aaKnown RBP11.71□□□□□ -0.53
SLIRP-212ENST00000613856 TUBBP07437 444 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 RHOXF2BP0C7M4 288 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 CHKAP35790 457 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 ATP5OP48047 213 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 KCNJ1P48048 391 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 NDST2P52849 883 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 CDH4P55283 916 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 GRM2Q14416 872 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 ELF2Q15723 593 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 ALFQ53S48 1182 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 MPP7Q5T2T1 576 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 RFWD3Q6PCD5 774 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 LRRC49Q8IUZ0 686 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 ARID3BQ8IVW6 561 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-212ENST00000613856 BBS7Q8IWZ6 715 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 CELF5Q8N6W0 485 aaKnown RBP11.71□□□□□ -0.53
SLIRP-212ENST00000613856 RIN3Q8TB24 985 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 ZSCAN18Q8TBC5 510 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-212ENST00000613856 CCHCR1Q8TD31 782 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 SEC14L1Q92503 715 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 OTUB2Q96DC9 234 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 MYEOVQ96EZ4 313 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 CCDC114Q96M63 670 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 ZSWIM3Q96MP5 696 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 RHOXF2Q9BQY4 288 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 OSBPL6Q9BZF3 934 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 RAB17Q9H0T7 212 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 SMG9Q9H0W8 520 aaKnown RBP11.71□□□□□ -0.53
SLIRP-212ENST00000613856 PCDH9Q9HC56 1237 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 RXFP3Q9NSD7 469 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 MPP6Q9NZW5 540 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 TBC1D14Q9P2M4 693 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.71□□□□□ -0.53
SLIRP-212ENST00000613856 ZNF148Q9UQR1 794 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 NEU2Q9Y3R4 380 aa11.71□□□□□ -0.53
SLIRP-212ENST00000613856 V9GYY5 206 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-212ENST00000613856 CNOT1A5YKK6 2376 aaKnown RBP11.71□□□□□ -0.54
SLIRP-212ENST00000613856 UQCRHLA0A096LP55 91 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 TYW5A2RUC4 315 aaKnown RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 SLC9A3R1O14745 358 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-212ENST00000613856 UQCRHP07919 91 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 SDHBP21912 280 aa11.7□□□□□ -0.54
SLIRP-212ENST00000613856 FCARP24071 287 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms