RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 AGGF1Q8N302 714 aaeCLIP12.57□□□□□ -0.4
CBWD1-220ENST00000612045 MAML1Q92585 1016 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 TCEAL4Q96EI5 215 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 GDF15Q99988 308 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 ROPN1BQ9BZX4 212 aaPredicted RBP12.57□□□□□ -0.4
CBWD1-220ENST00000612045 NKX2-4Q9H2Z4 354 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 ROPN1Q9HAT0 212 aaPredicted RBP12.57□□□□□ -0.4
CBWD1-220ENST00000612045 CHMP2BQ9UQN3 213 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 HCFC2Q9Y5Z7 792 aa12.57□□□□□ -0.4
CBWD1-220ENST00000612045 A0A087WUV0 522 aaPredicted RBP12.56□□□□□ -0.4
CBWD1-220ENST00000612045 SCAMP3O14828 347 aaKnown RBP12.56□□□□□ -0.4
CBWD1-220ENST00000612045 CACNG3O60359 315 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 MOSPD3O75425 235 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 AP2A1O95782 977 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 RHOP08100 348 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 MLNP12872 115 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 DDX6P26196 483 aaKnown RBP eCLIP12.56□□□□□ -0.4
CBWD1-220ENST00000612045 ACVRL1P37023 503 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 ELK3P41970 407 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 GPX6P59796 221 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 SERINC3Q13530 473 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 HNRNPDQ14103 355 aaKnown RBP12.56□□□□□ -0.4
CBWD1-220ENST00000612045 DNAJC21Q5F1R6 531 aaKnown RBP12.56□□□□□ -0.4
CBWD1-220ENST00000612045 ZNF697Q5TEC3 545 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 TTC39BQ5VTQ0 682 aaPredicted RBP12.56□□□□□ -0.4
CBWD1-220ENST00000612045 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 KCTD16Q68DU8 428 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 LRRC8BQ6P9F7 803 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 OTOP3Q7RTS5 596 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 ADGRD2Q7Z7M1 963 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 CROCCP2Q86T23 111 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 ZNF354CQ86Y25 554 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 PALM2Q8IXS6 379 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 ATP11CQ8NB49 1132 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 LEMD2Q8NC56 503 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 ARNTL2Q8WYA1 636 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 ATP6V1G3Q96LB4 118 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 VPS37BQ9H9H4 285 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 SP110Q9HB58 689 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 RBM22Q9NW64 420 aaKnown RBP eCLIP12.56□□□□□ -0.4
CBWD1-220ENST00000612045 ZDHHC7Q9NXF8 308 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 VPS18Q9P253 973 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 CFAP97Q9P2B7 532 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 MSRAQ9UJ68 235 aa12.56□□□□□ -0.4
CBWD1-220ENST00000612045 LSM7Q9UK45 103 aaKnown RBP12.56□□□□□ -0.4
CBWD1-220ENST00000612045 PDE4DIPQ5VU43 2346 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 A0A1B0GVM2 712 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 TLDC2A0PJX2 215 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 GOLGA6CA6NDK9 693 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 TCAF2A6NFQ2 919 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 ERI2A8K979 691 aaKnown RBP12.55□□□□□ -0.4
CBWD1-220ENST00000612045 HAX1O00165 279 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 GFRA2O00451 464 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 RASGRF2O14827 1237 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 TCEA3O75764 348 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 SUN1O94901 812 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 GOLGA6DP0CG33 693 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 TSHRP16473 764 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 RENBPP51606 427 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 IL10RBQ08334 325 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 PRPSAP1Q14558 356 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 STAT4Q14765 748 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 TEAD2Q15562 447 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 C6orf118Q5T5N4 469 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 GPR158Q5T848 1215 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 KCTD11Q693B1 232 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 CAPN12Q6ZSI9 719 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 C3orf62Q6ZUJ4 267 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 HTR3DQ70Z44 454 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 FAM217AQ8IXS0 508 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 TTC16Q8NEE8 873 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 EPS8L3Q8TE67 593 aaKnown RBP12.55□□□□□ -0.4
CBWD1-220ENST00000612045 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
CBWD1-220ENST00000612045 LRRC39Q96DD0 335 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 MLPHQ9BV36 600 aaPredicted RBP12.55□□□□□ -0.4
CBWD1-220ENST00000612045 PRKD2Q9BZL6 878 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 MAGEH1Q9H213 219 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 GLOD4Q9HC38 313 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 GOLGA6AQ9NYA3 693 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 ZNF510Q9Y2H8 683 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 TTLL3Q9Y4R7 772 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.55□□□□□ -0.4
CBWD1-220ENST00000612045 A0A0D9SEW6 157 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 CCDC195A0A1B0GUA6 201 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 SMIM23A6NLE4 172 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 HMGB1P1B2RPK0 211 aaPredicted RBP12.55□□□□□ -0.4
CBWD1-220ENST00000612045 LEFTY2O00292 366 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 HLA-DQB2P05538 268 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 POU2F2P09086 479 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 SSTR1P30872 391 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 PHBP35232 272 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 SLCO1A2P46721 670 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 IFNAR2P48551 515 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 GNA12Q03113 381 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 ZNF177Q13360 481 aaPredicted RBP12.55□□□□□ -0.4
CBWD1-220ENST00000612045 SPARCL1Q14515 664 aa12.55□□□□□ -0.4
CBWD1-220ENST00000612045 RAB30Q15771 203 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms