RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ELF1P32519 619 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 KRT9P35527 623 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 HNF1BP35680 557 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 RHAGQ02094 409 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 GHRHRQ02643 423 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 ZBTB16Q05516 673 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 STIM1Q13586 685 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 GALNT3Q14435 633 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 SEMA3AQ14563 771 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 IL13RA2Q14627 380 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 GPR68Q15743 365 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 SRSF7Q16629 238 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 SLC9C1Q4G0N8 1177 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 KIAA1755Q5JYT7 1200 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 SH2D4BQ5SQS7 431 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 SLC9C2Q5TAH2 1124 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 NAA35Q5VZE5 725 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 AADACL2Q6P093 401 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 TCP11L2Q8N4U5 519 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 LSM14AQ8ND56 463 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 ZBTB9Q96C00 473 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 RRP36Q96EU6 259 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 SH2D3AQ9BRG2 576 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 SCNM1Q9BWG6 230 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 PHF7Q9BWX1 381 aaPredicted RBP4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 NPLQ9BXD5 320 aaPredicted RBP4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 MAF1Q9H063 256 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 TTC12Q9H892 705 aaPredicted RBP4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 JMJD4Q9H9V9 463 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 Q9N2J8 555 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 UPB1Q9UBR1 384 aa4.67□□□□□ -1.66
SMCHD1-213ENST00000609587 CYP2D7A0A087X1C5 515 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 DPPA5A6NC42 116 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 TMEM247A6NEH6 219 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 FAM90A7PA6NKC0 464 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 FAM90A22PA8MWA6 464 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 FAM90A12PA8MX19 464 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 FAM90A23PA8MXZ1 464 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 STRNO43815 780 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 TULP3O75386 442 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 ATP1A3P13637 1013 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 CHRNA5P30532 468 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 GPD2P43304 727 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 CPA2P48052 419 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 CYP2J2P51589 502 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 CFHR1Q03591 330 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 GALNT2Q10471 571 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 DDX10Q13206 875 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 TDGQ13569 410 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 NAA25Q14CX7 972 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 PGM5Q15124 567 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 FAM171A1Q5VUB5 890 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 GJB7Q6PEY0 223 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 LRIG3Q6UXM1 1119 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 FAM57BQ71RH2 274 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 CYB5R4Q7L1T6 521 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 YTHDF3Q7Z739 585 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 CNGA4Q8IV77 575 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 TMEM217Q8N7C4 229 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 TSPYL6Q8N831 410 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 PCYOX1LQ8NBM8 494 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 RFWD2Q8NHY2 731 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 RNF125Q96EQ8 232 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 QTRT1Q9BXR0 403 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 PAIP1Q9H074 479 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 UNC45AQ9H3U1 944 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 DHDHQ9UQ10 334 aa4.66□□□□□ -1.66
SMCHD1-213ENST00000609587 SMIM35A0A1B0GVV1 85 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 C17orf100A8MU93 164 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 HBP1O60381 514 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 UGDHO60701 494 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 FCGR2AP12318 317 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 ATP5F1P24539 256 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 CIITAP33076 1130 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 GJC1P36383 396 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 ARHGAP25P42331 645 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 MTNR1AP48039 350 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 NR1H2P55055 460 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 RPS13P62277 151 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 RPP30P78346 268 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 MPP1Q00013 466 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 DAZAP2Q15038 168 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 BAK1Q16611 211 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 C5orf22Q49AR2 442 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 MTX3Q5HYI7 312 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 VWA5B1Q5TIE3 1220 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 SLC18B1Q6NT16 456 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 SLC22A25Q6T423 547 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 UBE2Q1Q7Z7E8 422 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 ADGRG6Q86SQ4 1221 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 SCAIQ8N9R8 606 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 RUFY2Q8WXA3 655 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 KAT2AQ92830 837 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 ZBTB10Q96DT7 871 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 APOPT1Q96IL0 206 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 PIMREGQ9BSJ6 248 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 FUZQ9BT04 418 aa4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMCHD1-213ENST00000609587 AGXT2Q9BYV1 514 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms