RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ZNF26P17031 533 aaPredicted RBP22.77■■□□□ 1.24
SHANK2-220ENST00000608988 TFEBP19484 476 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 TFE3P19532 575 aaPredicted RBP22.77■■□□□ 1.24
SHANK2-220ENST00000608988 TRAP1Q12931 704 aaKnown RBP22.77■■□□□ 1.24
SHANK2-220ENST00000608988 ANO4Q32M45 955 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 PPM1LQ5SGD2 360 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 EFCAB12Q6NXP0 572 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 DHRS4L2Q6PKH6 230 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 CCDC185Q8N715 623 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 HM13Q8TCT9 377 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 JDP2Q8WYK2 163 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 DNAJC1Q96KC8 554 aaKnown RBP22.77■■□□□ 1.24
SHANK2-220ENST00000608988 MINDY3Q9H8M7 445 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 CASS4Q9NQ75 786 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 DERAQ9Y315 318 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 ENO3P13929 434 aaPredicted RBP22.77■■□□□ 1.24
SHANK2-220ENST00000608988 YBX3P16989 372 aaKnown RBP eCLIP22.77■■□□□ 1.241e-6■■■■□ 24.3
SHANK2-220ENST00000608988 NPY2RP49146 381 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 BST2Q10589 180 aaKnown RBP22.77■■□□□ 1.24
SHANK2-220ENST00000608988 MPP3Q13368 585 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 MAPRE2Q15555 327 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 AMHR2Q16671 573 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 MGAT5BQ3V5L5 792 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 BSPRYQ5W0U4 402 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 ZNF567Q8N184 647 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 WDR55Q9H6Y2 383 aaPredicted RBP22.77■■□□□ 1.24
SHANK2-220ENST00000608988 DDX18Q9NVP1 670 aaKnown RBP22.77■■□□□ 1.24
SHANK2-220ENST00000608988 TBCCD1Q9NVR7 557 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 VANGL2Q9ULK5 521 aa22.77■■□□□ 1.24
SHANK2-220ENST00000608988 ZCWPW2A0A1B0GU75 182 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 TRPC5OSA6NMA1 111 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 NOP56O00567 594 aaKnown RBP22.76■■□□□ 1.23
SHANK2-220ENST00000608988 DDHD2O94830 711 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 H6PDO95479 791 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 RPS12P25398 132 aaKnown RBP22.76■■□□□ 1.23
SHANK2-220ENST00000608988 GRIA4P48058 902 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 EMP3P54852 163 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 PPP2R5DQ14738 602 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 OLFML2BQ68BL8 750 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 PDZD4Q76G19 769 aaPredicted RBP22.76■■□□□ 1.23
SHANK2-220ENST00000608988 SMARCAD1Q9H4L7 1026 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 TLK1Q9UKI8 766 aa22.76■■□□□ 1.23
SHANK2-220ENST00000608988 SOWAHBA6NEL2 793 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 VAPBO95292 243 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 PIGNO95427 931 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 LTFP02788 710 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 DNAJB2P25686 324 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 BCAT1P54687 386 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 PKNOX1P55347 436 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 PPIDQ08752 370 aaKnown RBP22.75■■□□□ 1.23
SHANK2-220ENST00000608988 CELF3Q5SZQ8 465 aaKnown RBP22.75■■□□□ 1.23
SHANK2-220ENST00000608988 ACOT1Q86TX2 421 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 CARM1Q86X55 608 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 RIOX2Q8IUF8 465 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 EME1Q96AY2 570 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 UHRF1Q96T88 793 aaPredicted RBP22.75■■□□□ 1.23
SHANK2-220ENST00000608988 GPR22Q99680 433 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 CCT7Q99832 543 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 BRD8Q9H0E9 1235 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 LRRC4Q9HBW1 653 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 PNPLA3Q9NST1 481 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 IPO11Q9UI26 975 aaKnown RBP22.75■■□□□ 1.23
SHANK2-220ENST00000608988 PCDHGB4Q9UN71 923 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 PCDHGB5Q9Y5G0 923 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 CFLARO15519 480 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 MTSS1O43312 755 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 EPHA3P29320 983 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 IRF9Q00978 393 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 PTK2BQ14289 1009 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 LPIN1Q14693 890 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 ARL13AQ5H913 290 aaPredicted RBP22.75■■□□□ 1.23
SHANK2-220ENST00000608988 NBPF12Q5TAG4 269 aaPredicted RBP22.75■■□□□ 1.23
SHANK2-220ENST00000608988 GALNT4Q8N4A0 578 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 ANKRD52Q8NB46 1076 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 RNF139Q8WU17 664 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 STYXQ8WUJ0 223 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 MAELQ96JY0 434 aaKnown RBP22.75■■□□□ 1.23
SHANK2-220ENST00000608988 HSFY1Q96LI6 401 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 KLHL32Q96NJ5 620 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 WRNIP1Q96S55 665 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 NUF2Q9BZD4 464 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 MRM3Q9HC36 420 aaKnown RBP22.75■■□□□ 1.23
SHANK2-220ENST00000608988 SARDHQ9UL12 918 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 MFHAS1Q9Y4C4 1052 aa22.75■■□□□ 1.23
SHANK2-220ENST00000608988 ZNF701M0R085 212 aaPredicted RBP22.74■■□□□ 1.23
SHANK2-220ENST00000608988 NEMP1O14524 444 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 IRF6O14896 467 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 NPHS1O60500 1241 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 RNASEH2AO75792 299 aaKnown RBP22.74■■□□□ 1.23
SHANK2-220ENST00000608988 CHRNGP07510 517 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 IQCF3P0C7M6 154 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 MATKP42679 507 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 PPIL2Q13356 520 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 TRIM25Q14258 630 aaKnown RBP22.74■■□□□ 1.23
SHANK2-220ENST00000608988 SLC25A52Q3SY17 297 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 TRIML2Q8N7C3 387 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 OR52K1Q8NGK4 314 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 VPS39Q96JC1 886 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 C1QTNF1Q9BXJ1 281 aa22.74■■□□□ 1.23
SHANK2-220ENST00000608988 B3GNT5Q9BYG0 378 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms