RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 IDH3AP50213 366 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 INTS6LQ5JSJ4 861 aaKnown RBP12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 STXBP5Q5T5C0 1151 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 FAM171BQ6P995 826 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 SERINC5Q86VE9 423 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 RASAL3Q86YV0 1011 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 SPATA6LQ8N4H0 392 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 IPMKQ8NFU5 416 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 URGCPQ8TCY9 931 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 DPF3Q92784 378 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 ADAM2Q99965 735 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 YY1AP1Q9H869 796 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 MPP6Q9NZW5 540 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 APOBEC2Q9Y235 224 aaKnown RBP12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 WASF2Q9Y6W5 498 aa12.02□□□□□ -0.48
HMGN3-AS1-201ENST00000604516 SIN3BO75182 1162 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 FAM163BP0C2L3 166 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SERPINB6P35237 376 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ABCE1P61221 599 aaKnown RBP12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 CRHR2Q13324 411 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 FAM91A1Q658Y4 838 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 DCLRE1AQ6PJP8 1040 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ZNF781Q8N8C0 355 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 PPP4R1Q8TF05 950 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 TRIB2Q92519 343 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 VPS39Q96JC1 886 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ACBD6Q9BR61 282 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 DMAP1Q9NPF5 467 aaPredicted RBP12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 GABRQQ9UN88 632 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 LRRC42Q9Y546 428 aa12.02□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 TRPM7Q96QT4 1865 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 TK2O00142 265 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 GPR182O15218 404 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 B4GALT3O60512 393 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 PAGE1O75459 146 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ZMPSTE24O75844 475 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SORBS2O94875 1100 aaKnown RBP12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 PSMG1O95456 288 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 IGHA2P01877 340 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 NCF2P19878 526 aaPredicted RBP12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 RPL9P32969 192 aaKnown RBP12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 CACNB2Q08289 660 aaPredicted RBP12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 CTBP1Q13363 440 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 NAB1Q13506 487 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 IRF5Q13568 498 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ZNF460Q14592 562 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 GRM3Q14832 879 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 RABGAP1LQ5R372 815 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 OVOS1Q6IE37 1185 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 RAPH1Q70E73 1250 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 DENND6AQ8IWF6 608 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 CASP10Q92851 521 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 FTHL17Q9BXU8 183 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 CHST12Q9NRB3 414 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SLC7A8Q9UHI5 535 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 TRHDEQ9UKU6 1024 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 PLA2G4CQ9UP65 541 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 NEU3Q9UQ49 428 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SCN10AQ9Y5Y9 1956 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 G3V2L1 256 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ZNF195O14628 629 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 GABRB3P28472 473 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 GRIK1P39086 918 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SERPINB8P50452 374 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 INSCQ1MX18 579 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 RALGPS1Q5JS13 557 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SNX30Q5VWJ9 437 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ITPRIPL1Q6GPH6 555 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ARHGAP12Q8IWW6 846 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SCUBE1Q8IWY4 988 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ULK2Q8IYT8 1036 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 PHTF2Q8N3S3 785 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 EFCAB3Q8N7B9 438 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 MAPK15Q8TD08 544 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 ZIC5Q96T25 663 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 IL22Q9GZX6 179 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 NMRK1Q9NWW6 199 aa12.01□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 PMPCBO75439 489 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 VAPBO95292 243 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 CHRNGP07510 517 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 MAGEA12P43365 314 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SLC5A3P53794 718 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 MGAT3Q09327 533 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 CDH17Q12864 832 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 METTL23Q86XA0 190 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SCN4BQ8IWT1 228 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 RSPH1Q8WYR4 309 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 STMN2Q93045 179 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 FCRL2Q96LA5 508 aaPredicted RBP12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 PANX3Q96QZ0 392 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SLC39A8Q9C0K1 460 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 NMUR1Q9HB89 426 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 NMRAL1Q9HBL8 299 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 TRMT13Q9NUP7 481 aaKnown RBP12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SLC2A6Q9UGQ3 507 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 SOX13Q9UN79 622 aa12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 RPL26L1Q9UNX3 145 aaKnown RBP12□□□□□ -0.49
HMGN3-AS1-201ENST00000604516 E9PBE3 544 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms