RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 SMARCE1Q969G3 411 aa17.31■□□□□ 0.36
CCDC12-210ENST00000604181 CEP63Q96MT8 703 aa17.31■□□□□ 0.36
CCDC12-210ENST00000604181 NOX5Q96PH1 765 aa17.31■□□□□ 0.36
CCDC12-210ENST00000604181 FEM1AQ9BSK4 669 aa17.31■□□□□ 0.36
CCDC12-210ENST00000604181 THAP9Q9H5L6 903 aa17.31■□□□□ 0.36
CCDC12-210ENST00000604181 LY6G6EA0A0G2JKS1 128 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 PRAMEF26H0Y7S4 382 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 MCF2LO15068 1137 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 P4HA2O15460 535 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 BNIP3LO60238 219 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 VASPP50552 380 aaPredicted RBP17.3■□□□□ 0.36
CCDC12-210ENST00000604181 OVGP1Q12889 678 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 ZNF211Q13398 564 aaPredicted RBP17.3■□□□□ 0.36
CCDC12-210ENST00000604181 KLHL10Q6JEL2 608 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 GJB7Q6PEY0 223 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 GPR155Q7Z3F1 870 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 DEFB106AQ8N104 65 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 WDTC1Q8N5D0 677 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 SH2D3CQ8N5H7 860 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 ZNF606Q8WXB4 792 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 ARRDC3Q96B67 414 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 NAF1Q96HR8 494 aaKnown RBP17.3■□□□□ 0.36
CCDC12-210ENST00000604181 SLC2A13Q96QE2 648 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 INTS2Q9H0H0 1204 aaKnown RBP17.3■□□□□ 0.36
CCDC12-210ENST00000604181 FAM204AQ9H8W3 233 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 ANLNQ9NQW6 1124 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC12-210ENST00000604181 DDIT4Q9NX09 232 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 MAN1B1Q9UKM7 699 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 U3KQA8 63 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 TRPM6Q9BX84 2022 aa17.3■□□□□ 0.36
CCDC12-210ENST00000604181 PIEZO2Q9H5I5 2752 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 BECN2A8MW95 431 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 K7ERQ8 282 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 FFAR2O15552 330 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 SNAP91O60641 907 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 RNGTTO60942 597 aaKnown RBP17.29■□□□□ 0.36
CCDC12-210ENST00000604181 GRAP2O75791 330 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 THEGLP0DJG4 465 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 CLDN2P57739 230 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 APBA1Q02410 837 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 KCNH2Q12809 1159 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 PDCLQ13371 301 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 AUHQ13825 339 aaKnown RBP17.29■□□□□ 0.36
CCDC12-210ENST00000604181 SETMARQ53H47 684 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-210ENST00000604181 OTUD1Q5VV17 481 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-210ENST00000604181 FAM46CQ5VWP2 391 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 TMC6Q7Z403 805 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 TRIM59Q8IWR1 403 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 OR13H1Q8NG92 308 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 OR4C6Q8NH72 309 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 KLHDC7BQ96G42 594 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 RPRD1AQ96P16 312 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-210ENST00000604181 CPXM1Q96SM3 734 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 PSMB7Q99436 277 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 ZFR2Q9UPR6 939 aaKnown RBP17.29■□□□□ 0.36
CCDC12-210ENST00000604181 HS3ST4Q9Y661 456 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 KIF26BQ2KJY2 2108 aa17.29■□□□□ 0.36
CCDC12-210ENST00000604181 COL27A1Q8IZC6 1860 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-210ENST00000604181 RP1P56715 2156 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 A0A1W2PQU0 124 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 PPP1R3GB7ZBB8 358 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 I6L893 689 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-210ENST00000604181 PSMA7O14818 248 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 THAP12O43422 761 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 MAGEC1O60732 1142 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 CNTN5O94779 1100 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 SMC2O95347 1197 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 MPOP05164 745 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 SRCP12931 536 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 ACTN2P35609 894 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 NUDT1P36639 197 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 CXADRP78310 365 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 KCNMA1Q12791 1236 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 ZNF284Q2VY69 593 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 RABGAP1LQ5R372 815 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 TTC39BQ5VTQ0 682 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-210ENST00000604181 CDCP2Q5VXM1 449 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 DSG4Q86SJ6 1040 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 SLC22A18ASQ8N1D0 253 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 CHST14Q8NCH0 376 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 CCDC34Q96HJ3 373 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 DHTKD1Q96HY7 919 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-210ENST00000604181 HIC2Q96JB3 615 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 MED15Q96RN5 788 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 GTPBP4Q9BZE4 634 aaKnown RBP17.28■□□□□ 0.36
CCDC12-210ENST00000604181 PREBQ9HCU5 417 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 UBE2TQ9NPD8 197 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-210ENST00000604181 KLHL11Q9NVR0 708 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 SLC25A13Q9UJS0 675 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 VPS28Q9UK41 221 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 SNX10Q9Y5X0 201 aa17.28■□□□□ 0.36
CCDC12-210ENST00000604181 MAST4O15021 2626 aa17.27■□□□□ 0.36
CCDC12-210ENST00000604181 C1QTNF3-AMACRE9PGA6 284 aa17.27■□□□□ 0.36
CCDC12-210ENST00000604181 ALOX15BO15296 676 aa17.27■□□□□ 0.36
CCDC12-210ENST00000604181 SMAD6O43541 496 aaKnown RBP17.27■□□□□ 0.36
CCDC12-210ENST00000604181 PIAS2O75928 621 aa17.27■□□□□ 0.36
CCDC12-210ENST00000604181 ZNF18P17022 549 aa17.27■□□□□ 0.36
CCDC12-210ENST00000604181 TFE3P19532 575 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms