RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 FBXL12Q9NXK8 326 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 TAS2R14Q9NYV8 317 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 SNX10Q9Y5X0 201 aa11.84□□□□□ -0.51
CCDC12-209ENST00000604164 MUC22E2RYF6 1773 aaPredicted RBP11.84□□□□□ -0.51
CCDC12-209ENST00000604164 ABCA7Q8IZY2 2146 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 A0A1B0GTW7 788 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 LNP1A1A4G5 178 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 LRRC72A6NJI9 287 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 CBX4O00257 560 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 DDX3XO00571 662 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC12-209ENST00000604164 FGF10O15520 208 aaPredicted RBP11.83□□□□□ -0.52
CCDC12-209ENST00000604164 LRIG2O94898 1065 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 GJB6O95452 261 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 IL1BP01584 269 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 SKILP12757 684 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 GOT1P17174 413 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 SLC8A1P32418 973 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 STK19P49842 368 aaPredicted RBP11.83□□□□□ -0.52
CCDC12-209ENST00000604164 ZNF135P52742 658 aaPredicted RBP11.83□□□□□ -0.52
CCDC12-209ENST00000604164 RPL7AP62424 266 aaKnown RBP11.83□□□□□ -0.52
CCDC12-209ENST00000604164 IRX4P78413 519 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 GNA12Q03113 381 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 DLG2Q15700 870 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 MANEALQ5VSG8 457 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 DCAF12L1Q5VU92 463 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 SPECC1LQ69YQ0 1117 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 PSTKQ8IV42 348 aaKnown RBP11.83□□□□□ -0.52
CCDC12-209ENST00000604164 MMAAQ8IVH4 418 aaKnown RBP11.83□□□□□ -0.52
CCDC12-209ENST00000604164 SLC41A1Q8IVJ1 513 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 STK40Q8N2I9 435 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 FRS2Q8WU20 508 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 PTPRN2Q92932 1015 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 SPON2Q9BUD6 331 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 XPO4Q9C0E2 1151 aaKnown RBP11.83□□□□□ -0.52
CCDC12-209ENST00000604164 CEP44Q9C0F1 390 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 ISCUQ9H1K1 167 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 MAGEH1Q9H213 219 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 SMOC1Q9H4F8 434 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 ATP13A1Q9HD20 1204 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 TMPRSS4Q9NRS4 437 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 TMEM248Q9NWD8 314 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 CNOT8Q9UFF9 292 aaKnown RBP11.83□□□□□ -0.52
CCDC12-209ENST00000604164 ADAMTS1Q9UHI8 967 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 VPS51Q9UID3 782 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 FZD10Q9ULW2 581 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 CFAP54Q96N23 3096 aa11.83□□□□□ -0.52
CCDC12-209ENST00000604164 A0A0D9SEW6 157 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 TMEM191CA6NGB0 347 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 ZSCAN5CA6NGD5 496 aaPredicted RBP11.82□□□□□ -0.52
CCDC12-209ENST00000604164 MCF2LO15068 1137 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 MID1O15344 667 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 BCAT2O15382 392 aaPredicted RBP11.82□□□□□ -0.52
CCDC12-209ENST00000604164 SLC7A4O43246 635 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 PRPSAP2O60256 369 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 GDF9O60383 454 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 RAMP2O60895 175 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 RNASEH2AO75792 299 aaKnown RBP11.82□□□□□ -0.52
CCDC12-209ENST00000604164 PRNPP04156 253 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 GYPCP04921 128 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 EPHB2P29323 1055 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 PSMD8P48556 350 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 TEAD4Q15561 434 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 NFKBIBQ15653 356 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 E4F1Q66K89 784 aaPredicted RBP11.82□□□□□ -0.52
CCDC12-209ENST00000604164 TCEAL6Q6IPX3 200 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 IL27RAQ6UWB1 636 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 CCDC185Q8N715 623 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 OR52K2Q8NGK3 314 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 SNX19Q92543 992 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 TCEAL3Q969E4 200 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 SKA1Q96BD8 255 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 FAM129BQ96TA1 746 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 PSMB7Q99436 277 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 KDM4CQ9H3R0 1056 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 MTG2Q9H4K7 406 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 CD93Q9NPY3 652 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 TMEM74BQ9NUR3 256 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 LCMT1Q9UIC8 334 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 ATXN2Q99700 1313 aaKnown RBP11.82□□□□□ -0.52
CCDC12-209ENST00000604164 SDK1Q7Z5N4 2213 aa11.82□□□□□ -0.52
CCDC12-209ENST00000604164 NUP205Q92621 2012 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 A0A1W2PP55 124 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 PATE3B3GLJ2 98 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 ARHGAP33O14559 1287 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 CREB3O43889 395 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 SRCP12931 536 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 ENGP17813 658 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 HNRNPH3P31942 346 aaKnown RBP11.81□□□□□ -0.52
CCDC12-209ENST00000604164 CASP14P31944 242 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 ACSL1P33121 698 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 NUDT1P36639 197 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 SERPINH1P50454 418 aaKnown RBP11.81□□□□□ -0.52
CCDC12-209ENST00000604164 YBEYP58557 167 aaPredicted RBP11.81□□□□□ -0.52
CCDC12-209ENST00000604164 TPI1P60174 286 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 PIGHQ14442 188 aaPredicted RBP11.81□□□□□ -0.52
CCDC12-209ENST00000604164 POLD3Q15054 466 aaPredicted RBP11.81□□□□□ -0.52
CCDC12-209ENST00000604164 ERMARDQ5T6L9 678 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 HGSNATQ68CP4 663 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 KIAA0895LQ68EN5 471 aa11.81□□□□□ -0.52
CCDC12-209ENST00000604164 Q6ZVU0 165 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms