RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 FBXO27Q8NI29 283 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 CXorf38Q8TB03 319 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 SPATA18Q8TC71 538 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 PRPF31Q8WWY3 499 aaKnown RBP8.18□□□□□ -1.1
HCG18-248ENST00000602861 SLC7A3Q8WY07 619 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 HSPH1Q92598 858 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 APBB2Q92870 758 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 CFAP36Q96G28 342 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 EAF1Q96JC9 268 aaPredicted RBP8.18□□□□□ -1.1
HCG18-248ENST00000602861 SRPK1Q96SB4 655 aaKnown RBP8.18□□□□□ -1.1
HCG18-248ENST00000602861 KATNAL1Q9BW62 490 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 CCDC106Q9BWC9 280 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 FRMD8Q9BZ67 464 aaPredicted RBP8.18□□□□□ -1.1
HCG18-248ENST00000602861 NMUR2Q9GZQ4 415 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 ELOVL4Q9GZR5 314 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 CLEC4MQ9H2X3 399 aaPredicted RBP8.18□□□□□ -1.1
HCG18-248ENST00000602861 NRBP2Q9NSY0 501 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 DDX43Q9NXZ2 648 aaKnown RBP8.18□□□□□ -1.1
HCG18-248ENST00000602861 PAK5Q9P286 719 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 ZNF212Q9UDV6 495 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 USP18Q9UMW8 372 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 SLC6A14Q9UN76 642 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.18□□□□□ -1.1
HCG18-248ENST00000602861 CITO14578 2027 aa8.18□□□□□ -1.1
HCG18-248ENST00000602861 COL4A4P53420 1690 aaPredicted RBP8.18□□□□□ -1.1
HCG18-248ENST00000602861 PDCD11Q14690 1871 aaKnown RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 CHD7Q9P2D1 2997 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 SCN5AQ14524 2016 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 MYO9BQ13459 2157 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 PRRC2BQ5JSZ5 2229 aaKnown RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 IGKV6-21A0A0C4DH24 114 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 BCLAF3A2AJT9 711 aaKnown RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 HMX2A2RU54 273 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 FAM159BA6NKW6 160 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 B2RBV5 119 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 F8W8V4 182 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 TRDMT1O14717 391 aaKnown RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 CAPN9O14815 690 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 UGT1A9O60656 530 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 NBNO60934 754 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 AVILO75366 819 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 PARNO95453 639 aaKnown RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 F2P00734 622 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 ATP5BP06576 529 aaKnown RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 CSH1P0DML2 217 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 CSH2P0DML3 217 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 CKBP12277 381 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 GPD1P21695 349 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 IL4RP24394 825 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 PGM1P36871 562 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 PLA2G5P39877 138 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 GPD2P43304 727 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 MAGEA3P43357 314 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 ZNF143P52747 638 aaPredicted RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 CDH6P55285 790 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 CDH8P55286 799 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 SESN3P58005 492 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 MXRA7P84157 204 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 TFAMQ00059 246 aaKnown RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 LAMTOR4Q0VGL1 99 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 TUBB3Q13509 450 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 CAMK2GQ13555 558 aaPredicted RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 THOC5Q13769 683 aaKnown RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 TFDP2Q14188 446 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 CCDC6Q16204 474 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 FAM117BQ6P1L5 589 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 MPZL3Q6UWV2 235 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 TIFABQ6ZNK6 161 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 ZNF534Q76KX8 674 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 VPS52Q8N1B4 723 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 PQLC3Q8N755 202 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 MCUQ8NE86 351 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 PPTC7Q8NI37 304 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 RAB3IL1Q8TBN0 382 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 CCDC110Q8TBZ0 833 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 TEKT4Q8WW24 435 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 GATA6Q92908 595 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 MCUR1Q96AQ8 359 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 E2F7Q96AV8 911 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 FAF2Q96CS3 445 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 FAM122AQ96E09 287 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 ANKRD36BP1Q96IX9 119 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 RNF157Q96PX1 679 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 CNPY3Q9BT09 278 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 MECRQ9BV79 373 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 NT5C1AQ9BXI3 368 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 SMG9Q9H0W8 520 aaKnown RBP8.17□□□□□ -1.1
HCG18-248ENST00000602861 SMYD3Q9H7B4 428 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 UGT1A7Q9HAW7 530 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 UGT1A10Q9HAW8 530 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 UGT1A8Q9HAW9 530 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 ASNSD1Q9NWL6 643 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 ARMCX1Q9P291 453 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 HMGXB4Q9UGU5 601 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 GTF2IRD1Q9UHL9 959 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 MUC3AQ02505 3323 aa8.17□□□□□ -1.1
HCG18-248ENST00000602861 ABHD14A-ACY1A0A1B0GW23 586 aa8.16□□□□□ -1.1
HCG18-248ENST00000602861 C2CD4BA6NLJ0 364 aa8.16□□□□□ -1.1
HCG18-248ENST00000602861 ENO4A6NNW6 628 aa8.16□□□□□ -1.1
HCG18-248ENST00000602861 SPECC1L-ADORA2AF8WAN1 911 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms