RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 IGDCC3Q8IVU1 814 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 CNPY4Q8N129 248 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 CNTD1Q8N815 330 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 MAGEH1Q9H213 219 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 LRRC40Q9H9A6 602 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 GLOD4Q9HC38 313 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 GKN1Q9NS71 199 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 EURLQ9NYK6 297 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 AGO1Q9UL18 857 aaKnown RBP22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 ZNF510Q9Y2H8 683 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 ANAPC1Q9H1A4 1944 aa22.74■■□□□ 1.23
PPFIA3-211ENST00000602848 SMIM23A6NLE4 172 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 GABRR2P28476 465 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 HOXA9P31269 272 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 SLC6A4P31645 630 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 IRAK1P51617 712 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 CLCN4P51793 760 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 SLC7A9P82251 487 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 SERINC3Q13530 473 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 PLPP4Q5VZY2 271 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 NAPEPLDQ6IQ20 393 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 FBF1Q8TES7 1133 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 C17orf80Q9BSJ5 609 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 DPP7Q9UHL4 492 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 ACTL7BQ9Y614 415 aa22.73■■□□□ 1.23
PPFIA3-211ENST00000602848 HIDE1A8MVS5 230 aa22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 NEBLO76041 1014 aa22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 DNAJB1P25685 340 aa22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 NPY2RP49146 381 aa22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 AGGF1Q8N302 714 aaeCLIP22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 TEX26Q8N6G2 289 aa22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 HMCESQ96FZ2 354 aa22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 ZFRQ96KR1 1074 aaKnown RBP22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 ZNF599Q96NL3 588 aa22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 GORASP1Q9BQQ3 440 aa22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 ASAH2Q9NR71 780 aa22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 RBM22Q9NW64 420 aaKnown RBP eCLIP22.72■■□□□ 1.23
PPFIA3-211ENST00000602848 DDX6P26196 483 aaKnown RBP eCLIP22.71■■□□□ 1.238e-8■■□□□ 14.5
PPFIA3-211ENST00000602848 GEMP55040 296 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 SMAD3P84022 425 aaKnown RBP22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 ARMC3Q5W041 872 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 GAREM2Q75VX8 874 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 SETD3Q86TU7 594 aaPredicted RBP22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 LEMD2Q8NC56 503 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 MICAL1Q8TDZ2 1067 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 STAMBPL1Q96FJ0 436 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 SP110Q9HB58 689 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 TRPC7Q9HCX4 862 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 CASS4Q9NQ75 786 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 HAUS2Q9NVX0 235 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 ZFP37Q9Y6Q3 630 aaPredicted RBP22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 MAGEB16A2A368 324 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 PEX11BO96011 259 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 HNRNPA1P09651 372 aaKnown RBP eCLIP22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 EPHA5P54756 1037 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 MARC1Q5VT66 337 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 STEAP4Q687X5 459 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 ZNF783Q6ZMS7 281 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 ARL14EPQ8N8R7 260 aaPredicted RBP22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 XPO6Q96QU8 1125 aaKnown RBP22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 DHRS4Q9BTZ2 278 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 MLPHQ9BV36 600 aaPredicted RBP22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 BFARQ9NZS9 450 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 PSMC3IPQ9P2W1 217 aaPredicted RBP22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 LSM7Q9UK45 103 aaKnown RBP22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 PCDHA11Q9Y5I1 949 aa22.71■■□□□ 1.23
PPFIA3-211ENST00000602848 MTCL1Q9Y4B5 1905 aaKnown RBP22.7■■□□□ 1.23
PPFIA3-211ENST00000602848 TRAV19A0A0A6YYK7 116 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 A0A1B0GVM2 712 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 TCAF2A6NFQ2 919 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 H3BNC9 293 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 GCAP28676 217 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 ETFBP38117 255 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 GRIA1P42261 906 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 FAM182AQ5T1J6 154 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 TXNDC8Q6A555 127 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 RFWD3Q6PCD5 774 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 FAM217AQ8IXS0 508 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 GSDMBQ8TAX9 411 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 ARHGEF2Q92974 986 aaKnown RBP22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 TGS1Q96RS0 853 aaKnown RBP22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 CAPS2Q9BXY5 557 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 SENP1Q9P0U3 644 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 COLQQ9Y215 455 aaPredicted RBP22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 MAD1L1Q9Y6D9 718 aa22.7■■□□□ 1.22
PPFIA3-211ENST00000602848 SHROOM3Q8TF72 1996 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 NYNRINQ9P2P1 1898 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 TCRBV9S1A1TA0A576 114 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 ILVBLA1L0T0 632 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 POC1B-GALNT4F8VUJ3 575 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 PRAMEF11O60813 436 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 SHOX2O60902 331 aaPredicted RBP22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 POU2F2P09086 479 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 PTPN2P17706 415 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 PRKCHP24723 683 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 HPDP32754 393 aaPredicted RBP22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 MSH2P43246 934 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 GNA12Q03113 381 aa22.69■■□□□ 1.22
PPFIA3-211ENST00000602848 ZNF177Q13360 481 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms