RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ALDH1A2O94788 518 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 SP9P0CG40 484 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 KDELR1P24390 212 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 PRKCHP24723 683 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 GJC1P36383 396 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 WASP42768 502 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 CLCN6P51797 869 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 GEMIN4P57678 1058 aaKnown RBP14.2□□□□□ -0.14
RNF40-212ENST00000602784 SERINC3Q13530 473 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 CAMK2GQ13555 558 aaPredicted RBP14.2□□□□□ -0.14
RNF40-212ENST00000602784 HNRNPA1L2Q32P51 320 aaKnown RBP14.2□□□□□ -0.14
RNF40-212ENST00000602784 ANKRD20A8PQ5CZ79 823 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 IL31Q6EBC2 164 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 SYCE1Q8N0S2 351 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 TSTD1Q8NFU3 115 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 RAPGEF5Q92565 580 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 SPON2Q9BUD6 331 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 CALN1Q9BXU9 219 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 FBRSQ9HAH7 460 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 POLR3BQ9NW08 1133 aaPredicted RBP14.2□□□□□ -0.14
RNF40-212ENST00000602784 TRIM10Q9UDY6 481 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 SLCO3A1Q9UIG8 710 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 HYOU1Q9Y4L1 999 aa14.2□□□□□ -0.14
RNF40-212ENST00000602784 A0A0U1RQJ8 604 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 EDDM13A0A1B0GTR0 161 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 MACROD2A1Z1Q3 448 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 GRID2IPA4D2P6 1211 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 ARHGAP42A6NI28 874 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 C3orf70A6NLC5 250 aaPredicted RBP14.19□□□□□ -0.14
RNF40-212ENST00000602784 RASA4BC9J798 803 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 CBX4O00257 560 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 RASA4O43374 803 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 SNAP91O60641 907 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 EPHX1P07099 455 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 CD48P09326 243 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 AMPD1P23109 780 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 ACVRL1P37023 503 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 PTPN5P54829 565 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 TCF15Q12870 199 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 ZFYVE27Q5T4F4 411 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 TMCO3Q6UWJ1 677 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 METTL3Q86U44 580 aaKnown RBP14.19□□□□□ -0.14
RNF40-212ENST00000602784 RASSF3Q86WH2 238 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 LRRC49Q8IUZ0 686 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 KATNAL2Q8IYT4 538 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 SH2D3CQ8N5H7 860 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 PRSS33Q8NF86 280 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 FRS2Q8WU20 508 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 ATRIPQ8WXE1 791 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 RPL10LQ96L21 214 aaKnown RBP14.19□□□□□ -0.14
RNF40-212ENST00000602784 RNF157Q96PX1 679 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 HHIPQ96QV1 700 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 GOLPH3Q9H4A6 298 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 ZSCAN32Q9NX65 697 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 PPP2R2CQ9Y2T4 447 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 PCDHA3Q9Y5H8 950 aa14.19□□□□□ -0.14
RNF40-212ENST00000602784 CCDC66A2RUB6 948 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 LRRD1A4D1F6 860 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 MT-CO1P00395 513 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 COL9A1P20849 921 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 GLDCP23378 1020 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 CTNNA1P35221 906 aaKnown RBP14.18□□□□□ -0.14
RNF40-212ENST00000602784 SERPINB6P35237 376 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 STK19P49842 368 aaPredicted RBP14.18□□□□□ -0.14
RNF40-212ENST00000602784 ARF5P84085 180 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 CCDC173Q0VFZ6 552 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 MMRN1Q13201 1228 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 TAZQ16635 292 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 ODF2Q5BJF6 829 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 KIAA1211LQ6NV74 962 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 TSSK4Q6SA08 328 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 NT5DC3Q86UY8 548 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 WDR5BQ86VZ2 330 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 LONP2Q86WA8 852 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 ARHGAP12Q8IWW6 846 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 RCOR2Q8IZ40 523 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 NPWQ8N729 165 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 ZBTB44Q8NCP5 570 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 PCDH19Q8TAB3 1148 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 CASKIN2Q8WXE0 1202 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 ISG20Q96AZ6 181 aaKnown RBP14.18□□□□□ -0.14
RNF40-212ENST00000602784 HMCESQ96FZ2 354 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 CEP44Q9C0F1 390 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 SLC39A8Q9C0K1 460 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 KCNF1Q9H3M0 494 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 PRSS16Q9NQE7 514 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 ETNK2Q9NVF9 386 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 KLHL11Q9NVR0 708 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 GUCA1BQ9UMX6 200 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 PCDHGA2Q9Y5H1 932 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 CKAP5Q14008 2032 aa14.18□□□□□ -0.14
RNF40-212ENST00000602784 TCRBV21S2A2A0A5A6 115 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 TTC34A8MYJ7 566 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 MIF4GDA9UHW6 222 aaKnown RBP14.17□□□□□ -0.14
RNF40-212ENST00000602784 AXIN1O15169 862 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 PALMO75781 387 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 ZRANB2O95218 330 aaKnown RBP eCLIP14.17□□□□□ -0.14
RNF40-212ENST00000602784 KRT1P04264 644 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 SRCP12931 536 aa14.17□□□□□ -0.14
RNF40-212ENST00000602784 HLA-EP13747 358 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms