RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MPP7Q5T2T1 576 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 ZNF783Q6ZMS7 281 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 RELL1Q8IUW5 271 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 ARID3BQ8IVW6 561 aaPredicted RBP18.38■□□□□ 0.53
VRK3-225ENST00000601912 ITFG1Q8TB96 612 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 DDI1Q8WTU0 396 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 MAML1Q92585 1016 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 ARHGEF2Q92974 986 aaKnown RBP18.38■□□□□ 0.53
VRK3-225ENST00000601912 ZSWIM3Q96MP5 696 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 PWWP2AQ96N64 755 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 IL12RB2Q99665 862 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 PHACTR1Q9C0D0 580 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 GBA3Q9H227 469 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 PABPC3Q9H361 631 aaKnown RBP18.38■□□□□ 0.53
VRK3-225ENST00000601912 DNAJC17Q9NVM6 304 aaKnown RBP18.38■□□□□ 0.53
VRK3-225ENST00000601912 LMCD1Q9NZU5 365 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 TBC1D14Q9P2M4 693 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 TRANK1O15050 2925 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 GOLGA6BA6NDN3 693 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 TMEM63AO94886 807 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 TCF3P15923 654 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 FSHRP23945 695 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 PSMB4P28070 264 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 PRPSAP1Q14558 356 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 CBX2Q14781 532 aaPredicted RBP18.38■□□□□ 0.53
VRK3-225ENST00000601912 IL31Q6EBC2 164 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 GPR149Q86SP6 731 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 CARNMT1Q8N4J0 409 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 MCUQ8NE86 351 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 ZSCAN18Q8TBC5 510 aaPredicted RBP18.38■□□□□ 0.53
VRK3-225ENST00000601912 USP33Q8TEY7 942 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 RUFY1Q96T51 708 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 KIF9Q9HAQ2 790 aa18.38■□□□□ 0.53
VRK3-225ENST00000601912 EIF2B3Q9NR50 452 aaKnown RBP18.38■□□□□ 0.53
VRK3-225ENST00000601912 RBM22Q9NW64 420 aaKnown RBP eCLIP18.38■□□□□ 0.53
VRK3-225ENST00000601912 GOLGA6CA6NDK9 693 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 J3KR12 359 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 EIF3HO15372 352 aaKnown RBP eCLIP18.37■□□□□ 0.53
VRK3-225ENST00000601912 LUC7L3O95232 432 aaKnown RBP18.37■□□□□ 0.53
VRK3-225ENST00000601912 GLP2RO95838 553 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 GOLGA6DP0CG33 693 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 HOXB8P17481 243 aaPredicted RBP18.37■□□□□ 0.53
VRK3-225ENST00000601912 WEE1P30291 646 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 ACVRL1P37023 503 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 GPS2Q13227 327 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 CDH18Q13634 790 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 SYCP2LQ5T4T6 812 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 MARC1Q5VT66 337 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 ANKRD54Q6NXT1 300 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 PABPC5Q96DU9 382 aaKnown RBP18.37■□□□□ 0.53
VRK3-225ENST00000601912 PPP1R2P1Q96PQ5 205 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 SPON2Q9BUD6 331 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 MUC3BQ9H195 1237 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 SEMA4AQ9H3S1 761 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 SAYSD1Q9NPB0 183 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 GOLGA6AQ9NYA3 693 aa18.37■□□□□ 0.53
VRK3-225ENST00000601912 HELZP42694 1942 aaKnown RBP18.37■□□□□ 0.53
VRK3-225ENST00000601912 MYO18AQ92614 2054 aaKnown RBP18.36■□□□□ 0.53
VRK3-225ENST00000601912 PDE4DIPQ5VU43 2346 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 A0A0D9SEW6 157 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 PRAMEF11O60813 436 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 PRAMEF12O95522 483 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 MAGEA4P43358 317 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 PDIA2Q13087 525 aaKnown RBP18.36■□□□□ 0.53
VRK3-225ENST00000601912 ZNF77Q15935 545 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 UAP1Q16222 522 aaPredicted RBP18.36■□□□□ 0.53
VRK3-225ENST00000601912 DENND2CQ68D51 928 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 CELF5Q8N6W0 485 aaKnown RBP18.36■□□□□ 0.53
VRK3-225ENST00000601912 CNTD1Q8N815 330 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 ZNF599Q96NL3 588 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 APOL5Q9BWW9 433 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 CDC42EP4Q9H3Q1 356 aaKnown RBP18.36■□□□□ 0.53
VRK3-225ENST00000601912 HAUS2Q9NVX0 235 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 TTLL3Q9Y4R7 772 aa18.36■□□□□ 0.53
VRK3-225ENST00000601912 NYNRINQ9P2P1 1898 aaKnown RBP18.36■□□□□ 0.53
VRK3-225ENST00000601912 ERI2A8K979 691 aaKnown RBP18.35■□□□□ 0.53
VRK3-225ENST00000601912 F5H423 210 aaPredicted RBP18.35■□□□□ 0.53
VRK3-225ENST00000601912 SLC9A3R1O14745 358 aaPredicted RBP18.35■□□□□ 0.53
VRK3-225ENST00000601912 PSMD3O43242 534 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 NFKB1P19838 968 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 CD68P34810 354 aaPredicted RBP18.35■□□□□ 0.53
VRK3-225ENST00000601912 OXCT1P55809 520 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 USP4Q13107 963 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 RNF219Q5W0B1 726 aaPredicted RBP18.35■□□□□ 0.53
VRK3-225ENST00000601912 CXorf57Q6NSI4 855 aaKnown RBP18.35■□□□□ 0.53
VRK3-225ENST00000601912 TPGS1Q6ZTW0 290 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 MFN1Q8IWA4 741 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 IQCKQ8N0W5 287 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 PDCD7Q8N8D1 485 aaKnown RBP18.35■□□□□ 0.53
VRK3-225ENST00000601912 OR7D4Q8NG98 312 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 OTUB2Q96DC9 234 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 TTC25Q96NG3 672 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 XAB2Q9HCS7 855 aaKnown RBP18.35■□□□□ 0.53
VRK3-225ENST00000601912 ATP13A1Q9HD20 1204 aa18.35■□□□□ 0.53
VRK3-225ENST00000601912 ALOX15BO15296 676 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 LINC01565O15544 149 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 KDELR3O43731 214 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 TTC4O95801 387 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 PEX11BO96011 259 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 GAD2Q05329 585 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms