RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 ZNF248Q8NDW4 579 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 OR13H1Q8NG92 308 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 ERCC4Q92889 916 aaPredicted RBP6.29□□□□□ -1.4
VRK3-220ENST00000600259 CCDC47Q96A33 483 aaKnown RBP6.29□□□□□ -1.4
VRK3-220ENST00000600259 ARRDC3Q96B67 414 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 RNF25Q96BH1 459 aaPredicted RBP6.29□□□□□ -1.4
VRK3-220ENST00000600259 KLHDC7BQ96G42 594 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 BTN2A3PQ96KV6 586 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 SPATA32Q96LK8 384 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 ZNF578Q96N58 590 aaPredicted RBP6.29□□□□□ -1.4
VRK3-220ENST00000600259 NOX5Q96PH1 765 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 FEM1AQ9BSK4 669 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 METTL14Q9HCE5 456 aaKnown RBP6.29□□□□□ -1.4
VRK3-220ENST00000600259 CPNE5Q9HCH3 593 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 GPR27Q9NS67 375 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.29□□□□□ -1.4
VRK3-220ENST00000600259 TJP2Q9UDY2 1190 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 ARMCX3Q9UH62 379 aaPredicted RBP6.29□□□□□ -1.4
VRK3-220ENST00000600259 ZFR2Q9UPR6 939 aaKnown RBP6.29□□□□□ -1.4
VRK3-220ENST00000600259 DOCK9Q9BZ29 2069 aa6.29□□□□□ -1.4
VRK3-220ENST00000600259 A0A1W2PQU0 124 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 TRIM49BA6NDI0 452 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 TCAF2A6NFQ2 919 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 I6L893 689 aaPredicted RBP6.28□□□□□ -1.4
VRK3-220ENST00000600259 K7ESM1 405 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 CAPN9O14815 690 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 SCAMP1O15126 338 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 CASC3O15234 703 aaKnown RBP6.28□□□□□ -1.4
VRK3-220ENST00000600259 ALOX15BO15296 676 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 SLC31A1O15431 190 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 EFSO43281 561 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 ZNF821O75541 412 aaPredicted RBP6.28□□□□□ -1.4
VRK3-220ENST00000600259 MPOP05164 745 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 THEGLP0DJG4 465 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 SRCP12931 536 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 PRLRP16471 622 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 ACADSBP45954 432 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 ERVPABLB-1P60509 514 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 YWHAZP63104 245 aaKnown RBP6.28□□□□□ -1.4
VRK3-220ENST00000600259 RHDQ02161 417 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 SULT2A1Q06520 285 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 PNOCQ13519 176 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 FGL2Q14314 439 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 MEA1Q16626 185 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 POM121L1PQ3SYA9 428 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 TMEM259Q4ZIN3 620 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 DCAF17Q5H9S7 520 aaPredicted RBP6.28□□□□□ -1.4
VRK3-220ENST00000600259 ZNF658Q5TYW1 1059 aaPredicted RBP6.28□□□□□ -1.4
VRK3-220ENST00000600259 FAM46CQ5VWP2 391 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 NEK5Q6P3R8 708 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 GCNT7Q6ZNI0 430 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 Q6ZVU0 165 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 RRAGAQ7L523 313 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 CHSY1Q86X52 802 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 ZNF683Q8IZ20 524 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 FMR1NBQ8N0W7 255 aaPredicted RBP6.28□□□□□ -1.4
VRK3-220ENST00000600259 LSMEM2Q8N112 164 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 SLC22A18ASQ8N1D0 253 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 SH2D3CQ8N5H7 860 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 EHBP1Q8NDI1 1231 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 OR2A12Q8NGT7 310 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 ZNF606Q8WXB4 792 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 OR8D1Q8WZ84 308 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 KLK6Q92876 244 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 VOPP1Q96AW1 172 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 FAM149B1Q96BN6 582 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 IFT43Q96FT9 208 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 NAF1Q96HR8 494 aaKnown RBP6.28□□□□□ -1.4
VRK3-220ENST00000600259 APOLD1Q96LR9 279 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 SLC46A1Q96NT5 459 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 NT5C1BQ96P26 610 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 SLC2A13Q96QE2 648 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 PSMB7Q99436 277 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 THAP9Q9H5L6 903 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 POLR1BQ9H9Y6 1135 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 POPDC2Q9HBU9 364 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 PREBQ9HCU5 417 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 ACP6Q9NPH0 428 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 ANLNQ9NQW6 1124 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 KLF15Q9UIH9 416 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D30Q9Y2I9 924 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 HS3ST3A1Q9Y663 406 aa6.28□□□□□ -1.4
VRK3-220ENST00000600259 TLN1Q9Y490 2541 aaKnown RBP6.27□□□□□ -1.41
VRK3-220ENST00000600259 TYW5A2RUC4 315 aaKnown RBP6.27□□□□□ -1.41
VRK3-220ENST00000600259 POM121BA6NF01 834 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 CAPN8A6NHC0 703 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 B8ZZF3 427 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 E5RJQ4 531 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 F5H5T6 163 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 K7ERQ8 282 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 RAD51BO15315 384 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 P4HA2O15460 535 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 SART1O43290 800 aaKnown RBP6.27□□□□□ -1.41
VRK3-220ENST00000600259 SMAD6O43541 496 aaKnown RBP6.27□□□□□ -1.41
VRK3-220ENST00000600259 USP12O75317 370 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 CSO75390 466 aaKnown RBP6.27□□□□□ -1.41
VRK3-220ENST00000600259 CNTN5O94779 1100 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 APOEP02649 317 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 GP1BAP07359 652 aa6.27□□□□□ -1.41
VRK3-220ENST00000600259 TGM2P21980 687 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms