RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ATP11CQ8NB49 1132 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 RUBCNQ92622 972 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 FAM129BQ96TA1 746 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 NCAPGQ9BPX3 1015 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 HINFPQ9BQA5 517 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 ACE2Q9BYF1 805 aaPredicted RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 RETREG1Q9H6L5 497 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 CATSPERBQ9H7T0 1116 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 ITM2CQ9NQX7 267 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 USP36Q9P275 1121 aaKnown RBP15.57■□□□□ 0.08
LIG1-219ENST00000600055 GMEB2Q9UKD1 530 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 TFR2Q9UP52 801 aa15.57■□□□□ 0.08
LIG1-219ENST00000600055 RAMP2O60895 175 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 RHOBTB1O94844 696 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 PROSCO94903 275 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 CD160O95971 181 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 ACADMP11310 421 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 FECHP22830 423 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 CDC25BP30305 580 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 GJC1P36383 396 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 MAGEA1P43355 309 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 TPMTP51580 245 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 TAS2R40P59535 323 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 POLD3Q15054 466 aaPredicted RBP15.56■□□□□ 0.08
LIG1-219ENST00000600055 ELF2Q15723 593 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 BOLA3Q53S33 107 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 ZNF776Q68DI1 518 aaPredicted RBP15.56■□□□□ 0.08
LIG1-219ENST00000600055 LEKR1Q6ZMV7 388 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 RFX8Q6ZV50 586 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 Q6ZVU0 165 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 METTL3Q86U44 580 aaKnown RBP15.56■□□□□ 0.08
LIG1-219ENST00000600055 PSTKQ8IV42 348 aaKnown RBP15.56■□□□□ 0.08
LIG1-219ENST00000600055 MMAAQ8IVH4 418 aaKnown RBP15.56■□□□□ 0.08
LIG1-219ENST00000600055 NETO2Q8NC67 525 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 KLC2Q9H0B6 622 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 RSPH9Q9H1X1 276 aaPredicted RBP15.56■□□□□ 0.08
LIG1-219ENST00000600055 MAGEH1Q9H213 219 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.56■□□□□ 0.08
LIG1-219ENST00000600055 CWC15Q9P013 229 aaKnown RBP15.56■□□□□ 0.08
LIG1-219ENST00000600055 HS3ST2Q9Y278 367 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 CKAP5Q14008 2032 aa15.56■□□□□ 0.08
LIG1-219ENST00000600055 USP34Q70CQ2 3546 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 DOCK4Q8N1I0 1966 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 EIF3CLB5ME19 914 aaKnown RBP15.55■□□□□ 0.08
LIG1-219ENST00000600055 FGF10O15520 208 aaPredicted RBP15.55■□□□□ 0.08
LIG1-219ENST00000600055 DAPK3O43293 454 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 BNIP3LO60238 219 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 LCA5LO95447 670 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 RETP07949 1114 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 ERCC2P18074 760 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 HTR7P34969 479 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 DHPSP49366 369 aaPredicted RBP15.55■□□□□ 0.08
LIG1-219ENST00000600055 RPL6Q02878 288 aaKnown RBP15.55■□□□□ 0.08
LIG1-219ENST00000600055 MESDQ14696 234 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 CCDC6Q16204 474 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 DPYSL2Q16555 572 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 ATP13A4Q4VNC1 1196 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 ARMCX6Q7L4S7 300 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 FAM124AQ86V42 546 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 C11orf74Q86VG3 221 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 CCDC170Q8IYT3 715 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 HMCESQ96FZ2 354 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 CELF6Q96J87 481 aaKnown RBP15.55■□□□□ 0.08
LIG1-219ENST00000600055 EIF3CQ99613 913 aaKnown RBP15.55■□□□□ 0.08
LIG1-219ENST00000600055 ARRDC1-AS1Q9H2J1 176 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 TNKS2Q9H2K2 1166 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 FBRSQ9HAH7 460 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 PARD6AQ9NPB6 346 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 WSB2Q9NYS7 404 aaPredicted RBP15.55■□□□□ 0.08
LIG1-219ENST00000600055 INTUQ9ULD6 942 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 MFHAS1Q9Y4C4 1052 aa15.55■□□□□ 0.08
LIG1-219ENST00000600055 RASA4BC9J798 803 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 MID1O15344 667 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 RASA4O43374 803 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 ZNF821O75541 412 aaPredicted RBP15.54■□□□□ 0.08
LIG1-219ENST00000600055 EPN2O95208 641 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 DNTTP04053 509 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 C7P10643 843 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 CD6P30203 668 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 CYLC1P35663 651 aaPredicted RBP15.54■□□□□ 0.08
LIG1-219ENST00000600055 ETFBP38117 255 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 PTGER3P43115 390 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 PSMD8P48556 350 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 SERPINH1P50454 418 aaKnown RBP15.54■□□□□ 0.08
LIG1-219ENST00000600055 METAP1P53582 386 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 SPEM2Q0P670 501 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 DPYSQ14117 519 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 RETSATQ6NUM9 610 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 RAD9BQ6WBX8 426 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 SLC36A4Q6YBV0 504 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 LPCAT2Q7L5N7 544 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 POLNQ7Z5Q5 900 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 ZNF354CQ86Y25 554 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 TMTC1Q8IUR5 882 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 UMODL1-AS1Q8N2C9 162 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 TEKT4Q8WW24 435 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 RFFLQ8WZ73 363 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 TOE1Q96GM8 510 aaKnown RBP15.54■□□□□ 0.08
LIG1-219ENST00000600055 SMOC1Q9H4F8 434 aa15.54■□□□□ 0.08
LIG1-219ENST00000600055 PCDH18Q9HCL0 1135 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms