RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 XPO1O14980 1071 aaKnown RBP13.49□□□□□ -0.25
VRK3-209ENST00000594948 DCLK1O15075 740 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 GRID2O43424 1007 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 FAM58BPP0C7Q3 252 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 LCP1P13796 627 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 MPSTP25325 297 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 PSMD8P48556 350 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 TTLL4Q14679 1199 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 BSPRYQ5W0U4 402 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 RBM44Q6ZP01 1051 aaKnown RBP13.49□□□□□ -0.25
VRK3-209ENST00000594948 DEFB106AQ8N104 65 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 EFCAB3Q8N7B9 438 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 TSNARE1Q96NA8 513 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 NPY6RQ99463 290 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 C1QTNF1Q9BXJ1 281 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 ACE2Q9BYF1 805 aaPredicted RBP13.49□□□□□ -0.25
VRK3-209ENST00000594948 SLC2A11Q9BYW1 496 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 UTP6Q9NYH9 597 aaKnown RBP13.49□□□□□ -0.25
VRK3-209ENST00000594948 CLIC5Q9NZA1 410 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 KLHL8Q9P2G9 620 aaPredicted RBP13.49□□□□□ -0.25
VRK3-209ENST00000594948 AKT3Q9Y243 479 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 NR2E3Q9Y5X4 410 aa13.49□□□□□ -0.25
VRK3-209ENST00000594948 CNMDO75829 334 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 OR6B1O95007 311 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 PGM3O95394 542 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 LTFP02788 710 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 SRGAP2BP0DMP2 458 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 HSPA1AP0DMV8 641 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 HSPA1BP0DMV9 641 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 TXNP10599 105 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 XRCC1P18887 633 aaPredicted RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 PTPN3P26045 913 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 NOS2P35228 1153 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 HCAR3P49019 387 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 MYBPC1Q00872 1141 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 IRF9Q00978 393 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 OTUD1Q5VV17 481 aaPredicted RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 CES3Q6UWW8 571 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 ZNF410Q86VK4 478 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 CCNYQ8ND76 341 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 STYXQ8WUJ0 223 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 RCN3Q96D15 328 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 NMD3Q96D46 503 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 VPS39Q96JC1 886 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 SNX27Q96L92 541 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 VAT1Q99536 393 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 WDR41Q9HAD4 459 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 ZBTB26Q9HCK0 441 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 TIMMDC1Q9NPL8 285 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 SETD4Q9NVD3 440 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 TRHDEQ9UKU6 1024 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 STAP1Q9ULZ2 295 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 FZD1Q9UP38 647 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 F5H423 210 aaPredicted RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 TRIM38O00635 465 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 ACOT8O14734 319 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 PSMD3O43242 534 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 DDHD2O94830 711 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 PIGNO95427 931 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 CYP2B6P20813 491 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 GRIA4P48058 902 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 NR1H2P55055 460 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 MRPS22P82650 360 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 PPIDQ08752 370 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 CEACAM7Q14002 265 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 TTLL12Q14166 644 aaPredicted RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 NADK2Q4G0N4 442 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 IRAK1BP1Q5VVH5 260 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 ITPRIPL1Q6GPH6 555 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 KLHDC10Q6PID8 442 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 KCNMB4Q86W47 210 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 FAM131BQ86XD5 332 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 TMEM151AQ8N4L1 468 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 TMEM102Q8N9M5 508 aaPredicted RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 NTAN1Q96AB6 310 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 MAML3Q96JK9 1138 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 MAELQ96JY0 434 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 GBA3Q9H227 469 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 DPEP3Q9H4B8 488 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 RHOJQ9H4E5 214 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 LRRC4Q9HBW1 653 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 MRM3Q9HC36 420 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 PIH1D1Q9NWS0 290 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 SEPT10Q9P0V9 454 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 TLK1Q9UKI8 766 aa13.48□□□□□ -0.25
VRK3-209ENST00000594948 GNEQ9Y223 722 aaKnown RBP13.48□□□□□ -0.25
VRK3-209ENST00000594948 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 POLR2AP24928 1970 aaKnown RBP13.47□□□□□ -0.25
VRK3-209ENST00000594948 SHROOM3Q8TF72 1996 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 NFKBIEO00221 500 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 EEF2KO00418 725 aaKnown RBP13.47□□□□□ -0.25
VRK3-209ENST00000594948 PPEF2O14830 753 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 NPHS1O60500 1241 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 LGALS2P05162 132 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 TFEBP19484 476 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 ADORA2BP29275 332 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 ZNF135P52742 658 aaPredicted RBP13.47□□□□□ -0.25
VRK3-209ENST00000594948 IGBP1P78318 339 aa13.47□□□□□ -0.25
VRK3-209ENST00000594948 SCAPQ12770 1279 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms