RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CNTN5O94779 1100 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 IRF1P10914 325 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 VAV1P15498 845 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 CCNCP24863 283 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 VPS41P49754 854 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 PLTPP55058 493 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 YBEYP58557 167 aaPredicted RBP13.79□□□□□ -0.2
VMP1-217ENST00000593168 NTHL1P78549 312 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 ZXDBP98169 803 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 AP1B1Q10567 949 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 SLC5A9Q2M3M2 681 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 ALFQ53S48 1182 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 STXBP5Q5T5C0 1151 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 TTC39BQ5VTQ0 682 aaPredicted RBP13.79□□□□□ -0.2
VMP1-217ENST00000593168 RHBDF2Q6PJF5 856 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 B4GALNT4Q76KP1 1039 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 CHST9Q7L1S5 443 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 OTOP3Q7RTS5 596 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 TP53INP2Q8IXH6 220 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 FAM217AQ8IXS0 508 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 GSPT2Q8IYD1 628 aaKnown RBP13.79□□□□□ -0.2
VMP1-217ENST00000593168 CMTM8Q8IZV2 173 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 CCNYQ8ND76 341 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 P2RY11Q96G91 374 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 NEUROG2Q9H2A3 272 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 NDFIP2Q9NV92 336 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 MTRF1LQ9UGC7 380 aaKnown RBP13.79□□□□□ -0.2
VMP1-217ENST00000593168 FBXL21Q9UKT6 434 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 SH3BP1Q9Y3L3 701 aa13.79□□□□□ -0.2
VMP1-217ENST00000593168 SMAPO00193 183 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 LEFTY2O00292 366 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 GFRA2O00451 464 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 TP73O15350 636 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 CLDN11O75508 207 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 STK10O94804 968 aaKnown RBP13.78□□□□□ -0.2
VMP1-217ENST00000593168 TCF3P15923 654 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 WEE1P30291 646 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 AVPR1AP37288 418 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 IRAK1P51617 712 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 ITGA8P53708 1063 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 CDH4P55283 916 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 IZUMO3Q5VZ72 239 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 HIBCHQ6NVY1 386 aaPredicted RBP13.78□□□□□ -0.2
VMP1-217ENST00000593168 RFWD3Q6PCD5 774 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 CCDC13Q8IYE1 715 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 CPXM2Q8N436 756 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 CCDC33Q8N5R6 958 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 NETO2Q8NC67 525 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 FBXO25Q8TCJ0 367 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 FATE1Q969F0 183 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 CELF6Q96J87 481 aaKnown RBP13.78□□□□□ -0.2
VMP1-217ENST00000593168 FMO2Q99518 471 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 VAT1Q99536 393 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 FOXP3Q9BZS1 431 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 TSPYL1Q9H0U9 437 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 NOL6Q9H6R4 1146 aaKnown RBP13.78□□□□□ -0.2
VMP1-217ENST00000593168 CFAP97Q9P2B7 532 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
VMP1-217ENST00000593168 MRPS23Q9Y3D9 190 aaKnown RBP13.78□□□□□ -0.2
VMP1-217ENST00000593168 ZFP37Q9Y6Q3 630 aaPredicted RBP13.78□□□□□ -0.2
VMP1-217ENST00000593168 A0A0A0MRY4 1105 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 E2F8A0AVK6 867 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 KRBA1A5PL33 1030 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 ATP8B1O43520 1251 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 OPHN1O60890 802 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 CHKAP35790 457 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 WASHC5Q12768 1159 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 MORF4L2Q15014 288 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 PARP15Q460N3 678 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 TIGD7Q6NT04 549 aaPredicted RBP13.77□□□□□ -0.21
VMP1-217ENST00000593168 TFAP2DQ7Z6R9 452 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 HOOK3Q86VS8 718 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 FANCMQ8IYD8 2048 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 MREGQ8N565 214 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 ATPAF2Q8N5M1 289 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 CCDC110Q8TBZ0 833 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 LRRN4Q8WUT4 740 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 RMDN1Q96DB5 314 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 MYEOVQ96EZ4 313 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 PRICKLE1Q96MT3 831 aaPredicted RBP13.77□□□□□ -0.21
VMP1-217ENST00000593168 SPATA13Q96N96 652 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 TDP1Q9NUW8 608 aa13.77□□□□□ -0.21
VMP1-217ENST00000593168 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
VMP1-217ENST00000593168 DOCK8Q8NF50 2099 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 FRYLO94915 3013 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 A0A1B0GVM2 712 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 MED19A0JLT2 244 aaPredicted RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 TCAF2A6NFQ2 919 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 ARHGAP42A6NI28 874 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 RASA4BC9J798 803 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 RNF103O00237 685 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 DFFAO00273 331 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 RASA4O43374 803 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 MAFKO60675 156 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 RAMP2O60895 175 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 FAM153BP0C7A2 387 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 OR1E1P30953 314 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 MAGEA6P43360 314 aa13.76□□□□□ -0.21
VMP1-217ENST00000593168 PAPOLAP51003 745 aaKnown RBP13.76□□□□□ -0.21
VMP1-217ENST00000593168 NRLP54845 237 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms