RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 RNF157Q96PX1 679 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 OSBPL8Q9BZF1 889 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 ABCB8Q9NUT2 735 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 TMEM248Q9NWD8 314 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 DDX56Q9NY93 547 aaKnown RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 DEC1Q9P2X7 70 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 INTS6Q9UL03 887 aaKnown RBP9.89□□□□□ -0.83
DDX39A-220ENST00000593008 HCN2Q9UL51 889 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 SLC8A2Q9UPR5 921 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 ZNF510Q9Y2H8 683 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 GPR179Q6PRD1 2367 aa9.89□□□□□ -0.83
DDX39A-220ENST00000593008 DOCK4Q8N1I0 1966 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 CFAP54Q96N23 3096 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 CTAGE9A4FU28 777 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 PRRT4C9JH25 899 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 H0Y626 953 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 DFFAO00273 331 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 APOL1O14791 398 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 DAPK3O43293 454 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 CACNG3O60359 315 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 LILRB5O75023 590 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 ZRANB2O95218 330 aaKnown RBP eCLIP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 KLF8O95600 359 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 RHOCP08134 193 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 CISD3P0C7P0 127 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 CASQ1P31415 396 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 CHKAP35790 457 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 ARL4AP40617 200 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 EIF2DP41214 584 aaKnown RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 GRIA2P42262 883 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 STK19P49842 368 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 KLF1Q13351 362 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 CDH18Q13634 790 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 DMC1Q14565 340 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 PDK2Q15119 407 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 RNF219Q5W0B1 726 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 PAPD7Q5XG87 772 aaKnown RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 LINGO4Q6UY18 593 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 PRR23BQ6ZRT6 265 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 CHST9Q7L1S5 443 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 SLC13A5Q86YT5 568 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 RCOR2Q8IZ40 523 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 ALLCQ8N6M5 410 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 TXNDC5Q8NBS9 432 aaKnown RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 USP33Q8TEY7 942 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 ALG14Q96F25 216 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 RBM41Q96IZ5 413 aaKnown RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 NCAPGQ9BPX3 1015 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 HINFPQ9BQA5 517 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 FAM126AQ9BYI3 521 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 CEP41Q9BYV8 373 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 SLC39A8Q9C0K1 460 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 LRRC19Q9H756 370 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 PPARGC1AQ9UBK2 798 aaKnown RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 HEY1Q9Y5J3 304 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 OR51B4Q9Y5P0 310 aa9.88□□□□□ -0.83
DDX39A-220ENST00000593008 MUC22E2RYF6 1773 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 RIF1Q5UIP0 2472 aaKnown RBP9.88□□□□□ -0.83
DDX39A-220ENST00000593008 RASA4BC9J798 803 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 FGF10O15520 208 aaPredicted RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 RASA4O43374 803 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 HRO43593 1189 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 GJB3O75712 270 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 PAPSS2O95340 614 aaPredicted RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 FGGP02679 453 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 CYBBP04839 570 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 CHRM1P11229 460 aaPredicted RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 VAV1P15498 845 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 OR1E1P30953 314 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 PTPN7P35236 360 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 WASP42768 502 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 CDH4P55283 916 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 MRPS25P82663 173 aaKnown RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 OTUD4Q01804 1114 aaKnown RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 PPP2R5EQ16537 467 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 ODF2Q5BJF6 829 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 TFDP3Q5H9I0 405 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 PITRM1Q5JRX3 1037 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 SEL1L2Q5TEA6 688 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 AFMIDQ63HM1 303 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 GRAMD4Q6IC98 578 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 TMCO3Q6UWJ1 677 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 BBS12Q6ZW61 710 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 SYT13Q7L8C5 426 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 PRUNE1Q86TP1 453 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 ADIPOR2Q86V24 386 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 LONP2Q86WA8 852 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 DCLK2Q8N568 766 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 ZNF366Q8N895 744 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 TERB1Q8NA31 727 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 SUMF1Q8NBK3 374 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 LRRN4CLQ8ND94 238 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 CYB5D2Q8WUJ1 264 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 C1orf54Q8WWF1 131 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 ACDQ96AP0 544 aa9.87□□□□□ -0.83
DDX39A-220ENST00000593008 XPO6Q96QU8 1125 aaKnown RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 DDX50Q9BQ39 737 aaKnown RBP9.87□□□□□ -0.83
DDX39A-220ENST00000593008 SPON2Q9BUD6 331 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms