RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 KDM1BQ8NB78 822 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 CCNYQ8ND76 341 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 NSMCE1Q8WV22 266 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 TFB1MQ8WVM0 346 aaKnown RBP10.91□□□□□ -0.66
SMAD4-214ENST00000592186 FAM3CQ92520 227 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 HDAC11Q96DB2 347 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 HMCESQ96FZ2 354 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 P2RY11Q96G91 374 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 CELF6Q96J87 481 aaKnown RBP10.91□□□□□ -0.66
SMAD4-214ENST00000592186 MS4A14Q96JA4 679 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 ZNF599Q96NL3 588 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 ELOVL2Q9NXB9 296 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 IPO11Q9UI26 975 aaKnown RBP10.91□□□□□ -0.66
SMAD4-214ENST00000592186 CDC23Q9UJX2 597 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 CLEC4EQ9ULY5 219 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 SLC8A2Q9UPR5 921 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 STARD13Q9Y3M8 1113 aa10.91□□□□□ -0.66
SMAD4-214ENST00000592186 CBX4O00257 560 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 KRIT1O00522 736 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 MCF2LO15068 1137 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 ZNF185O15231 689 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 FANCGO15287 622 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 MFSD11O43934 449 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 PRAMEF11O60813 436 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 SRPRAP08240 638 aaKnown RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 DLDP09622 509 aaKnown RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 ALADP13716 330 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 STIP1P31948 543 aaKnown RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 ACVRL1P37023 503 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 RENBPP51606 427 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 STARD6P59095 220 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 EIF3EP60228 445 aaKnown RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 OTUD4Q01804 1114 aaKnown RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 CKAP4Q07065 602 aaKnown RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 PPIDQ08752 370 aaKnown RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 SLC10A2Q12908 348 aaPredicted RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 NOMO1Q15155 1222 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 TMEM196Q5HYL7 178 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 DGKKQ5KSL6 1271 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 MBLAC2Q68D91 279 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 C12orf40Q86WS4 652 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 CDKL3Q8IVW4 592 aaPredicted RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 BBS5Q8N3I7 341 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 PHTF2Q8N3S3 785 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 SYNPOQ8N3V7 929 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 MNS1Q8NEH6 495 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 OR52K2Q8NGK3 314 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 ACTL9Q8TC94 416 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 WFDC5Q8TCV5 224 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 CHFRQ96EP1 664 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 OLFM3Q96PB7 478 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 UHRF1Q96T88 793 aaPredicted RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 ARHGEF3Q9NR81 526 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 SAE1Q9UBE0 346 aaPredicted RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 AMACRQ9UHK6 382 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 SLC25A13Q9UJS0 675 aa10.9□□□□□ -0.66
SMAD4-214ENST00000592186 DRG1Q9Y295 367 aaKnown RBP10.9□□□□□ -0.66
SMAD4-214ENST00000592186 TCRBV7S2A1N4TA0A589 114 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 CFAP69A5D8W1 941 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 H7C0C1 242 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 CCDC188H7C350 402 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 MATN3O15232 486 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 MAFKO60675 156 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 ZMPSTE24O75844 475 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 STK10O94804 968 aaKnown RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 RBP3P10745 1247 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 PECAM1P16284 738 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 ATP5OP48047 213 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 SOX9P48436 509 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 ST8SIA6P61647 398 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 ZXDAP98168 799 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 AP1B1Q10567 949 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 BYSLQ13895 437 aaKnown RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 HNRNPDQ14103 355 aaKnown RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 GEN1Q17RS7 908 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 SLC45A4Q5BKX6 768 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 DARS2Q6PI48 645 aaKnown RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 NPNTQ6UXI9 565 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 TPRG1Q6ZUI0 275 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 TRMT11Q7Z4G4 463 aaKnown RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 ADAT2Q7Z6V5 191 aaKnown RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 ZC3H18Q86VM9 953 aaKnown RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 CCDC13Q8IYE1 715 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 APCDD1Q8J025 514 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 OR7D4Q8NG98 312 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 SLC35B2Q8TB61 432 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 EDAQ92838 391 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 NKD2Q969F2 451 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 CAPZA3Q96KX2 299 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 RUNDC3BQ96NL0 473 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 VAT1Q99536 393 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 HERPUD2Q9BSE4 406 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 CIPCQ9C0C6 399 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 SP110Q9HB58 689 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 CD320Q9NPF0 282 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 VPS51Q9UID3 782 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 MUTYHQ9UIF7 546 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 INTS6Q9UL03 887 aaKnown RBP10.89□□□□□ -0.67
SMAD4-214ENST00000592186 ERVW-1Q9UQF0 538 aa10.89□□□□□ -0.67
SMAD4-214ENST00000592186 ZNF148Q9UQR1 794 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms