RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ACSL1P33121 698 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 EIF4A3P38919 411 aaKnown RBP14.28□□□□□ -0.12
CLIP3-205ENST00000592017 NOVA1P51513 510 aaKnown RBP14.28□□□□□ -0.12
CLIP3-205ENST00000592017 PLK1P53350 603 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 ADKP55263 362 aaKnown RBP14.28□□□□□ -0.12
CLIP3-205ENST00000592017 SULT2A1Q06520 285 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 ZNF252P-AS1Q0IIN9 211 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 TSR1Q2NL82 804 aaKnown RBP14.28□□□□□ -0.12
CLIP3-205ENST00000592017 HNRNPA1L2Q32P51 320 aaKnown RBP14.28□□□□□ -0.12
CLIP3-205ENST00000592017 ACCSLQ4AC99 568 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 WDR45BQ5MNZ6 344 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 SYCP2LQ5T4T6 812 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 FAM72AQ5TYM5 149 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 FAM72DQ6L9T8 149 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 SARM1Q6SZW1 724 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 SETD3Q86TU7 594 aaPredicted RBP14.28□□□□□ -0.12
CLIP3-205ENST00000592017 FAM72BQ86X60 149 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 PYROXD2Q8N2H3 581 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 OR8K1Q8NGG5 319 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 TBC1D31Q96DN5 1066 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 ALG14Q96F25 216 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 SPON2Q9BUD6 331 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 GTPBP2Q9BX10 602 aaKnown RBP14.28□□□□□ -0.12
CLIP3-205ENST00000592017 THAP2Q9H0W7 228 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 RBSNQ9H1K0 784 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 OSBPL2Q9H1P3 480 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 MRPL47Q9HD33 250 aaKnown RBP14.28□□□□□ -0.12
CLIP3-205ENST00000592017 ABHD10Q9NUJ1 306 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 GPATCH2LQ9NWQ4 482 aa14.28□□□□□ -0.12
CLIP3-205ENST00000592017 A0A0D9SEW6 157 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 EDDM13A0A1B0GTR0 161 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 TMEM191CA6NGB0 347 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 ARHGAP33O14559 1287 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 CREB3O43889 395 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 SNAP91O60641 907 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 RNF8O76064 485 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 VAV1P15498 845 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 CSRP1P21291 193 aaKnown RBP14.27□□□□□ -0.13
CLIP3-205ENST00000592017 PMLP29590 882 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 KRT83P78385 493 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 ZBTB16Q05516 673 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 SCAPQ12770 1279 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 ARID5BQ14865 1188 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 C9orf64Q5T6V5 341 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 MANEALQ5VSG8 457 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 DCAF12L1Q5VU92 463 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 ZNF776Q68DI1 518 aaPredicted RBP14.27□□□□□ -0.13
CLIP3-205ENST00000592017 ALKBH5Q6P6C2 394 aaKnown RBP14.27□□□□□ -0.13
CLIP3-205ENST00000592017 RABEPKQ7Z6M1 372 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 KDM1BQ8NB78 822 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 DEFB124Q8NES8 71 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 OR7D4Q8NG98 312 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 C1orf216Q8TAB5 229 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 CNTNAP3BQ96NU0 1288 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 PSMB7Q99436 277 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 DNAJC7Q99615 494 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 C2orf49Q9BVC5 232 aaPredicted RBP14.27□□□□□ -0.13
CLIP3-205ENST00000592017 CNTNAP3Q9BZ76 1288 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 RSPH9Q9H1X1 276 aaPredicted RBP14.27□□□□□ -0.13
CLIP3-205ENST00000592017 C6orf106Q9H6K1 298 aaPredicted RBP14.27□□□□□ -0.13
CLIP3-205ENST00000592017 FBRSQ9HAH7 460 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 PPARGC1AQ9UBK2 798 aaKnown RBP14.27□□□□□ -0.13
CLIP3-205ENST00000592017 PCSK1NQ9UHG2 260 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 VPS51Q9UID3 782 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 FZD10Q9ULW2 581 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 OR51B4Q9Y5P0 310 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 SLCO1B1Q9Y6L6 691 aa14.27□□□□□ -0.13
CLIP3-205ENST00000592017 CACNA1EQ15878 2313 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 NUP205Q92621 2012 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 PLXND1Q9Y4D7 1925 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 MEI4A8MW99 385 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 CBX4O00257 560 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 BNIP3LO60238 219 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 DNTTP04053 509 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 GNSP15586 552 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 RHOQP17081 205 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 GLDCP23378 1020 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 EPHB2P29323 1055 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 HNRNPH3P31942 346 aaKnown RBP14.26□□□□□ -0.13
CLIP3-205ENST00000592017 NRG1Q02297 640 aaPredicted RBP14.26□□□□□ -0.13
CLIP3-205ENST00000592017 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 TTC31Q49AM3 519 aaPredicted RBP14.26□□□□□ -0.13
CLIP3-205ENST00000592017 ARTNQ5T4W7 220 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 LINGO4Q6UY18 593 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 PIP4P1Q86T03 277 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 ZCCHC9Q8N567 271 aaKnown RBP14.26□□□□□ -0.13
CLIP3-205ENST00000592017 MINDY1Q8N5J2 469 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 DCAF4L2Q8NA75 395 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 GANCQ8TET4 914 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 ARHGEF26Q96DR7 871 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 FAM129BQ96TA1 746 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 EPAS1Q99814 870 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 NUP85Q9BW27 656 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 MIR1-1HGQ9H1L0 117 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 ATP13A1Q9HD20 1204 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 EIF2B4Q9UI10 523 aaKnown RBP14.26□□□□□ -0.13
CLIP3-205ENST00000592017 DNAI1Q9UI46 699 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 AP4E1Q9UPM8 1137 aa14.26□□□□□ -0.13
CLIP3-205ENST00000592017 NEU3Q9UQ49 428 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms