RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 PTPRN2Q92932 1015 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 TCEAL3Q969E4 200 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 CCDC42Q96M95 316 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 HSPA12BQ96MM6 686 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 PEBP4Q96S96 227 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 CHP1Q99653 195 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 SNRNP25Q9BV90 132 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 PACSIN1Q9BY11 444 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 ZWILCHQ9H900 591 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 FBRSQ9HAH7 460 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 SPTLC3Q9NUV7 552 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 TMEM248Q9NWD8 314 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 CTTNBP2NLQ9P2B4 639 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 NEU3Q9UQ49 428 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 PCDHGA5Q9Y5G8 931 aa14.38□□□□□ -0.11
SCAMP4-212ENST00000590266 BCLAF3A2AJT9 711 aaKnown RBP14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 TARSL2A2RTX5 802 aaKnown RBP14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 MEI4A8MW99 385 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 MID1O15344 667 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 DAPK3O43293 454 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 RAMP2O60895 175 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 LRCH4O75427 683 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 CYP1A2P05177 515 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 SRCP12931 536 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 ITPKAP23677 461 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 GJC1P36383 396 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 MAPKAPK2P49137 400 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 ZNF75DP51815 510 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 ZNF33AQ06730 810 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 CST6Q15828 149 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 CSRP2Q16527 193 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 SLC18A3Q16572 532 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 SMTNL2Q2TAL5 461 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 POM121L1PQ3SYA9 428 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 PPP6R3Q5H9R7 873 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 ERMARDQ5T6L9 678 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 PRR23CQ6ZRP0 262 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 METTL3Q86U44 580 aaKnown RBP14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 SH2D3CQ8N5H7 860 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 FNIP1Q8TF40 1166 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 SNX19Q92543 992 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 HSPH1Q92598 858 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 OMDQ99983 421 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 RSPH9Q9H1X1 276 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 TNKS2Q9H2K2 1166 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 NHEJ1Q9H9Q4 299 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 WSB2Q9NYS7 404 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 ZNF212Q9UDV6 495 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 ACTL7AQ9Y615 435 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 OTOGLQ3ZCN5 2332 aa14.37□□□□□ -0.11
SCAMP4-212ENST00000590266 A0A1W2PP55 124 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 SSU72P8A0A1W2PR75 194 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 FAM47DPA6NHR8 397 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 PATE3B3GLJ2 98 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 EEF2KO00418 725 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 SMAD6O43541 496 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 ATP9BO43861 1147 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 LRP3O75074 770 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 RNASEH2AO75792 299 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 TCF4P15884 667 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 TGM1P22735 817 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 OXTRP30559 389 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 DNA2P51530 1060 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 TBX2Q13207 712 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 MAPK8IP2Q13387 824 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 ELAVL3Q14576 367 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 POLD3Q15054 466 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 KCNT1Q5JUK3 1230 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 ZNF783Q6ZMS7 281 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 SLC41A1Q8IVJ1 513 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 ZNF564Q8TBZ8 553 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 FRS2Q8WU20 508 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 OR8D1Q8WZ84 308 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 KCTD15Q96SI1 283 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 FAM129BQ96TA1 746 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 PABPC3Q9H361 631 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 CATSPERBQ9H7T0 1116 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 VPS45Q9NRW7 570 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 FBXL12Q9NXK8 326 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 DLL3Q9NYJ7 618 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 SERGEFQ9UGK8 458 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 IP6K2Q9UHH9 426 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 HPCAL4Q9UM19 191 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 NCKAP1Q9Y2A7 1128 aa14.36□□□□□ -0.11
SCAMP4-212ENST00000590266 MUC22E2RYF6 1773 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 FRYLO94915 3013 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 TMEM110-MUSTN1A8MSY1 372 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 MYO1FO00160 1098 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 GDF9O60383 454 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 CFIP05156 583 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 H2AFZP0C0S5 128 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 ZNF806P0C7X5 589 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 GOT1P17174 413 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 MAOBP27338 520 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 SLC8A1P32418 973 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 ACSL1P33121 698 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 ETFBP38117 255 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 ZBTB16Q05516 673 aa14.35□□□□□ -0.11
SCAMP4-212ENST00000590266 PIGHQ14442 188 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms