RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 CCDC114Q96M63 670 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 FAM129BQ96TA1 746 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 PSMB7Q99436 277 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 MAGEB5Q9BZ81 275 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 BTBD1Q9H0C5 482 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 SGK2Q9HBY8 427 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 ATP13A1Q9HD20 1204 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 TMEM248Q9NWD8 314 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 FBXL12Q9NXK8 326 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 ZNF212Q9UDV6 495 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 HS3ST2Q9Y278 367 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 FARP1Q9Y4F1 1045 aaPredicted RBP17.32■□□□□ 0.36
H3F3B-208ENST00000589599 SPAG17Q6Q759 2223 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 ABCA7Q8IZY2 2146 aa17.32■□□□□ 0.36
H3F3B-208ENST00000589599 A0A087X0T9 212 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 CREB3O43889 395 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 PRPSAP2O60256 369 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 SNAP91O60641 907 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 ADH1BP00325 375 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 IL1BP01584 269 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 FAM228BP0C875 321 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 GNSP15586 552 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 C5AR1P21730 350 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 EPHB2P29323 1055 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 EIF4A3P38919 411 aaKnown RBP17.31■□□□□ 0.36
H3F3B-208ENST00000589599 CLCN6P51797 869 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 PUM1Q14671 1186 aaKnown RBP eCLIP17.31■□□□□ 0.36
H3F3B-208ENST00000589599 DUOXA1Q1HG43 343 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 FAM46CQ5VWP2 391 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 ALKBH5Q6P6C2 394 aaKnown RBP17.31■□□□□ 0.36
H3F3B-208ENST00000589599 SLC41A1Q8IVJ1 513 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 OR8D1Q8WZ84 308 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 RMDN1Q96DB5 314 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 DNAJC7Q99615 494 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 OMDQ99983 421 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 NUSAP1Q9BXS6 441 aaKnown RBP17.31■□□□□ 0.36
H3F3B-208ENST00000589599 MAGEH1Q9H213 219 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 DEF6Q9H4E7 631 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 CATSPERBQ9H7T0 1116 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 DONSONQ9NYP3 566 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 ARHGAP20Q9P2F6 1191 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 EVLQ9UI08 416 aaPredicted RBP17.31■□□□□ 0.36
H3F3B-208ENST00000589599 DNAI1Q9UI46 699 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 HPCAL4Q9UM19 191 aa17.31■□□□□ 0.36
H3F3B-208ENST00000589599 METTL12A8MUP2 240 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 EIF3CLB5ME19 914 aaKnown RBP17.3■□□□□ 0.36
H3F3B-208ENST00000589599 ALOX15BO15296 676 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 MID1O15344 667 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 RAMP2O60895 175 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 SEMA4FO95754 770 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 MT-CO1P00395 513 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 CFIP05156 583 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 SRCP12931 536 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 VAV1P15498 845 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 HTR7P34969 479 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 PSMD8P48556 350 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 ACAP1Q15027 740 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 TRIM61Q5EBN2 209 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 ERMARDQ5T6L9 678 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 TCEAL6Q6IPX3 200 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 LINGO4Q6UY18 593 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 NLRP14Q86W24 1093 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 PYROXD2Q8N2H3 581 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 TCEAL3Q969E4 200 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 EIF3CQ99613 913 aaKnown RBP17.3■□□□□ 0.36
H3F3B-208ENST00000589599 TRIM5Q9C035 493 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 THAP2Q9H0W7 228 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 TMEM74BQ9NUR3 256 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 SUSD2Q9UGT4 822 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 PCSK1NQ9UHG2 260 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 SLC6A14Q9UN76 642 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 DMXL1Q9Y485 3027 aa17.3■□□□□ 0.36
H3F3B-208ENST00000589599 PATE3B3GLJ2 98 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 MCF2LO15068 1137 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 FGF10O15520 208 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 BNIP3LO60238 219 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 GDF9O60383 454 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 RNASEH2AO75792 299 aaKnown RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 GOT1P17174 413 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 MIPP30301 263 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 ACSL1P33121 698 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 RECQLP46063 649 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 LIMK1P53667 647 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 GEMIN4P57678 1058 aaKnown RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 PIGHQ14442 188 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 POLD3Q15054 466 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 PEAR1Q5VY43 1037 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 SARM1Q6SZW1 724 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 Q6ZVU0 165 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 PSTKQ8IV42 348 aaKnown RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 HDDC3Q8N4P3 179 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 RTL3Q8N8U3 475 aaKnown RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 DNASE2BQ8WZ79 361 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 ARHGEF2Q92974 986 aaKnown RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 RTKNQ9BST9 563 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 ACE2Q9BYF1 805 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 TRIM7Q9C029 511 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 DHX35Q9H5Z1 703 aaKnown RBP17.29■□□□□ 0.36
H3F3B-208ENST00000589599 DLL3Q9NYJ7 618 aa17.29■□□□□ 0.36
H3F3B-208ENST00000589599 IP6K2Q9UHH9 426 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms