RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CLDN5O00501 218 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 TIMM44O43615 452 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SNNO75324 88 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 H2AFYO75367 372 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 AP2A1O95782 977 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 LTFP02788 710 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SERPINE1P05121 402 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 MPOP05164 745 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SRGAP2BP0DMP2 458 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 ERCC2P18074 760 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 PSMB4P28070 264 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 TKTP29401 623 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 CYP2C18P33260 490 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 PGM1P36871 562 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 RGS2P41220 211 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 MXRA7P84157 204 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 NIPAL4Q0D2K0 466 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 DPYSQ14117 519 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 TAF11Q15544 211 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 TAF1CQ15572 869 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 MAPRE1Q15691 268 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 FSCN1Q16658 493 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 PRAMEF19Q5SWL8 479 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 OLFML2BQ68BL8 750 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 BNIPLQ7Z465 357 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SMG8Q8ND04 991 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 PPFIBP2Q8ND30 876 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 TMEM40Q8WWA1 233 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 IRGQQ8WZA9 623 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 CERS2Q96G23 380 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SYT15Q9BQS2 421 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 MECRQ9BV79 373 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 CXorf56Q9H5V9 222 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 PLAC1Q9HBJ0 212 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SPC25Q9HBM1 224 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 XPNPEP3Q9NQH7 507 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 FBXO6Q9NRD1 293 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 PIGVQ9NUD9 493 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 ARL8BQ9NVJ2 186 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 DDIT4Q9NX09 232 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 TAGLN3Q9UI15 199 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 DSEQ9UL01 958 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 VANGL2Q9ULK5 521 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 GIT1Q9Y2X7 761 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SCN1AP35498 2009 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 B2RBV5 119 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 DCLK1O15075 740 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 HCRTO43612 131 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 UGT1A9O60656 530 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 MAGEC1O60732 1142 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 USP1O94782 785 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 APOA4P06727 396 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 ZNF865P0CJ78 1059 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 TPBGLP0DKB5 382 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 KITP10721 976 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 RARBP10826 455 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 ACAT1P24752 427 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 GRIA1P42261 906 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SLC1A6P48664 564 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SERPINB8P50452 374 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 DAOAP59103 153 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 MRPS6P82932 125 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SOX4Q06945 474 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 PPIDQ08752 370 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 NAA25Q14CX7 972 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 ACCSLQ4AC99 568 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 N4BP2L1Q5TBK1 243 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SYPL2Q5VXT5 272 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 NAPEPLDQ6IQ20 393 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 LMNTD2Q8IXW0 634 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 CCDC33Q8N5R6 958 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 GABPB2Q8TAK5 448 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 HDAC11Q96DB2 347 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 MRGPRX2Q96LB1 330 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 COLEC11Q9BWP8 271 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 CADM1Q9BY67 442 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 ULBP1Q9BZM6 244 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 NMUR2Q9GZQ4 415 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 IL22Q9GZX6 179 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 C1orf21Q9H246 121 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 DENND2DQ9H6A0 471 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 UGT1A7Q9HAW7 530 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 UGT1A10Q9HAW8 530 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 UGT1A8Q9HAW9 530 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 TAS2R1Q9NYW7 299 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 KANSL3Q9P2N6 904 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 AAR2Q9Y312 384 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 HBS1LQ9Y450 684 aaKnown RBP7.56□□□□□ -1.2
ZNF540-206ENST00000589117 LRRC42Q9Y546 428 aa7.56□□□□□ -1.2
ZNF540-206ENST00000589117 CCDC195A0A1B0GUA6 201 aa7.55□□□□□ -1.2
ZNF540-206ENST00000589117 HMX2A2RU54 273 aa7.55□□□□□ -1.2
ZNF540-206ENST00000589117 F8W8V4 182 aa7.55□□□□□ -1.2
ZNF540-206ENST00000589117 TPP1O14773 563 aa7.55□□□□□ -1.2
ZNF540-206ENST00000589117 ADCY6O43306 1168 aa7.55□□□□□ -1.2
ZNF540-206ENST00000589117 PLIN3O60664 434 aa7.55□□□□□ -1.2
ZNF540-206ENST00000589117 PEX11AO75192 247 aa7.55□□□□□ -1.2
ZNF540-206ENST00000589117 ODC1P11926 461 aa7.55□□□□□ -1.2
ZNF540-206ENST00000589117 YBX3P16989 372 aaKnown RBP eCLIP7.55□□□□□ -1.2
ZNF540-206ENST00000589117 GRNP28799 593 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms