RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CBX4O00257 560 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 MFSD11O43934 449 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 IL12RB1P42701 662 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 TAZQ16635 292 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 PARP15Q460N3 678 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 FNDC3BQ53EP0 1204 aaKnown RBP19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 MEI1Q5TIA1 1274 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 ZNF354CQ86Y25 554 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 RFX6Q8HWS3 928 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 RCOR2Q8IZ40 523 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 UBL4BQ8N7F7 174 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 MYO19Q96H55 970 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 MMP17Q9ULZ9 603 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 SHROOM3Q8TF72 1996 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 ZNF318Q5VUA4 2279 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 SGK1O00141 431 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 ADAM23O75077 832 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 ZMPSTE24O75844 475 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 KRT10P13645 584 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 AVPR2P30518 371 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 NTSR1P30989 418 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 SERPINB6P35237 376 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 ARF5P84085 180 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 SULT2A1Q06520 285 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 SERINC3Q13530 473 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 PAFAH1B3Q15102 231 aaKnown RBP19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 AADACL2Q6P093 401 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 SERPINA13PQ6UXR4 307 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 LINGO4Q6UY18 593 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 TRMT11Q7Z4G4 463 aaKnown RBP19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 SPEM1Q8N4L4 309 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 LZTR1Q8N653 840 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 ACDQ96AP0 544 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 IER2Q9BTL4 223 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 SLC25A13Q9UJS0 675 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 PLA2G4CQ9UP65 541 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 STON1Q9Y6Q2 735 aa19.41■□□□□ 0.7
CLPTM1-209ENST00000588855 hCG_1818297A0A087WSY0 165 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 DFFAO00273 331 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 SRPRAP08240 638 aaKnown RBP19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 PRKCHP24723 683 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 PAPOLAP51003 745 aaKnown RBP19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 DYNLT1P63172 113 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 ZNF211Q13398 564 aaPredicted RBP19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 ENPP2Q13822 863 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 HSF5Q4G112 596 aaPredicted RBP19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 TFDP3Q5H9I0 405 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 DCAF12L1Q5VU92 463 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 SLC9A4Q6AI14 798 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 C17orf53Q8N3J3 647 aaPredicted RBP19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 PLD5Q8N7P1 536 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 ZNF366Q8N895 744 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 LRFN3Q9BTN0 628 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 MAK16Q9BXY0 300 aaKnown RBP19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 SPATA6Q9NWH7 488 aaPredicted RBP19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 SLCO3A1Q9UIG8 710 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 ACTL7AQ9Y615 435 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 RAD54BQ9Y620 910 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 WDFY4Q6ZS81 3184 aa19.4■□□□□ 0.7
CLPTM1-209ENST00000588855 CACNA1IQ9P0X4 2223 aa19.39■□□□□ 0.7
CLPTM1-209ENST00000588855 GOLGA6L9A6NEM1 432 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 ARHGAP42A6NI28 874 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 APOL1O14791 398 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 NPC1O15118 1278 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 ATG13O75143 517 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 MAP3K6O95382 1288 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 MT-CO1P00395 513 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 PYGMP11217 842 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 HLA-EP13747 358 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 ST8SIA6P61647 398 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 GBE1Q04446 702 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 ADCY2Q08462 1091 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 PPP2R5EQ16537 467 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 ZNF569Q5MCW4 686 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 KAZNQ674X7 775 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 LEKR1Q6ZMV7 388 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 ARHGAP36Q6ZRI8 547 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 ERLEC1Q96DZ1 483 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 GABRG3Q99928 467 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 TMEM245Q9H330 911 aa19.39■□□□□ 0.69
CLPTM1-209ENST00000588855 KDELR3O43731 214 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 CD160O95971 181 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 HOXB2P14652 356 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 COL9A1P20849 921 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 COPS2P61201 443 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 SATB1Q01826 763 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 E2F5Q15329 346 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 RPS6KA1Q15418 735 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 EOGTQ5NDL2 527 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 RETSATQ6NUM9 610 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 SYT13Q7L8C5 426 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 SLC35F6Q8N357 371 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 SH2D3CQ8N5H7 860 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 DTWD2Q8NBA8 298 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 HERPUD2Q9BSE4 406 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 HEMGNQ9BXL5 484 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 HPCAL4Q9UM19 191 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 HS3ST2Q9Y278 367 aa19.38■□□□□ 0.69
CLPTM1-209ENST00000588855 TTC34A8MYJ7 566 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms