RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 DCAF12L1Q5VU92 463 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 NLRP14Q86W24 1093 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 APCDD1Q8J025 514 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 CYB5D2Q8WUJ1 264 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 TEKT4Q8WW24 435 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 GABRG3Q99928 467 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 FEM1AQ9BSK4 669 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 ZWILCHQ9H900 591 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 POLR3BQ9NW08 1133 aaPredicted RBP20.65■□□□□ 0.9
ATG4D-208ENST00000588667 CACNA2D2Q9NY47 1150 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 PLA2G4CQ9UP65 541 aa20.65■□□□□ 0.9
ATG4D-208ENST00000588667 TDGF1P13385 188 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 HOXB2P14652 356 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 HOXA6P31267 233 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 DGKEP52429 567 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 TPI1P60174 286 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 SULT2A1Q06520 285 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 DPYSL2Q16555 572 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 SMTNL2Q2TAL5 461 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 TEX35Q5T0J7 233 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 SEL1L2Q5TEA6 688 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 LRRC38Q5VT99 294 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 RNF219Q5W0B1 726 aaPredicted RBP20.64■□□□□ 0.9
ATG4D-208ENST00000588667 TSSK4Q6SA08 328 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 ZNF783Q6ZMS7 281 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 CAMKK1Q8N5S9 505 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 SPATA4Q8NEY3 305 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 ALG14Q96F25 216 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 KCTD15Q96SI1 283 aaPredicted RBP20.64■□□□□ 0.9
ATG4D-208ENST00000588667 MUC3BQ9H195 1237 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 CATSPERBQ9H7T0 1116 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 OR51B4Q9Y5P0 310 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 STON1Q9Y6Q2 735 aa20.64■□□□□ 0.9
ATG4D-208ENST00000588667 ILVBLA1L0T0 632 aa20.64■□□□□ 0.89
ATG4D-208ENST00000588667 FGF10O15520 208 aaPredicted RBP20.64■□□□□ 0.89
ATG4D-208ENST00000588667 SP9P0CG40 484 aa20.64■□□□□ 0.89
ATG4D-208ENST00000588667 COL9A1P20849 921 aa20.64■□□□□ 0.89
ATG4D-208ENST00000588667 IL12RB1P42701 662 aa20.64■□□□□ 0.89
ATG4D-208ENST00000588667 PTPRNQ16849 979 aa20.64■□□□□ 0.89
ATG4D-208ENST00000588667 KCNT1Q5JUK3 1230 aa20.64■□□□□ 0.89
ATG4D-208ENST00000588667 FAM126AQ9BYI3 521 aaPredicted RBP20.64■□□□□ 0.89
ATG4D-208ENST00000588667 IRF2BPLQ9H1B7 796 aa20.64■□□□□ 0.89
ATG4D-208ENST00000588667 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.64■□□□□ 0.89
ATG4D-208ENST00000588667 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.64■□□□□ 0.89
ATG4D-208ENST00000588667 VPS28Q9UK41 221 aa20.64■□□□□ 0.89
ATG4D-208ENST00000588667 V9GYY5 206 aaPredicted RBP20.64■□□□□ 0.89
ATG4D-208ENST00000588667 NUP205Q92621 2012 aa20.64■□□□□ 0.89
ATG4D-208ENST00000588667 H0Y858 1186 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 EEF2KO00418 725 aaKnown RBP20.63■□□□□ 0.89
ATG4D-208ENST00000588667 RARAP10276 462 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 WASP42768 502 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 ECT2LQ008S8 904 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 ERCC6LQ2NKX8 1250 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 FNDC3BQ53EP0 1204 aaKnown RBP20.63■□□□□ 0.89
ATG4D-208ENST00000588667 PPP6R3Q5H9R7 873 aaPredicted RBP20.63■□□□□ 0.89
ATG4D-208ENST00000588667 TXNRD3NBQ6F5E7 133 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 SERPINA13PQ6UXR4 307 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 TMEM92Q6UXU6 159 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 RTL3Q8N8U3 475 aaKnown RBP20.63■□□□□ 0.89
ATG4D-208ENST00000588667 TSTD1Q8NFU3 115 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 HSPH1Q92598 858 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 HHIPQ96QV1 700 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 SMARCAL1Q9NZC9 954 aa20.63■□□□□ 0.89
ATG4D-208ENST00000588667 WASH4PA8MWX3 477 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 APBB3O95704 486 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 SRPRAP08240 638 aaKnown RBP20.62■□□□□ 0.89
ATG4D-208ENST00000588667 ETFBP38117 255 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 NRLP54845 237 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 TAS2R40P59535 323 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 ZNF211Q13398 564 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-208ENST00000588667 KATNAL2Q8IYT4 538 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 DCAF4L2Q8NA75 395 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 KDM1BQ8NB78 822 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 NELL1Q92832 810 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 C2orf49Q9BVC5 232 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-208ENST00000588667 TMEM245Q9H330 911 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 POLMQ9NP87 494 aaPredicted RBP20.62■□□□□ 0.89
ATG4D-208ENST00000588667 NDFIP2Q9NV92 336 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 DONSONQ9NYP3 566 aa20.62■□□□□ 0.89
ATG4D-208ENST00000588667 A0A0D9SEW6 157 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 WASH3PC4AMC7 463 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 DYNC1I1O14576 645 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 FGGP02679 453 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 KRT7P08729 469 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 PYGMP11217 842 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 GOT1P17174 413 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 CTSOP43234 321 aaPredicted RBP20.61■□□□□ 0.89
ATG4D-208ENST00000588667 HCAR3P49019 387 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 ST8SIA6P61647 398 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 GNA12Q03113 381 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 C2orf54Q08AI8 447 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 STARD3Q14849 445 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 LONRF2Q1L5Z9 754 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 RFX8Q6ZV50 586 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 POLNQ7Z5Q5 900 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 MRGPRX3Q96LB0 322 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 CD248Q9HCU0 757 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 ERVW-1Q9UQF0 538 aa20.61■□□□□ 0.89
ATG4D-208ENST00000588667 ARIH1Q9Y4X5 557 aaPredicted RBP20.61■□□□□ 0.89
ATG4D-208ENST00000588667 EML5Q05BV3 1969 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms