RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 A0A0D9SEW6 157 aa26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 TBL1XO60907 577 aa26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 TPSB2P20231 275 aa26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 GNA12Q03113 381 aa26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 ZNF177Q13360 481 aaPredicted RBP26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 CBX2Q14781 532 aaPredicted RBP26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 TPSAB1Q15661 275 aa26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 ZNF77Q15935 545 aa26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 RARS2Q5T160 578 aaKnown RBP26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 TMA16Q96EY4 203 aaKnown RBP26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 PHACTR1Q9C0D0 580 aa26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 GBA3Q9H227 469 aa26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 NUP210Q8TEM1 1887 aaPredicted RBP26.59■■□□□ 1.85
SCAMP4-210ENST00000588555 ILVBLA1L0T0 632 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 TCF3P15923 654 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 USP4Q13107 963 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 HIF1AQ16665 826 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 UBAP2Q5T6F2 1119 aaKnown RBP26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 TDRD5Q8NAT2 981 aaKnown RBP26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 PABPC3Q9H361 631 aaKnown RBP26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 CDC42EP4Q9H3Q1 356 aaKnown RBP26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 F5H423 210 aaPredicted RBP26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 HOXD9P28356 352 aaPredicted RBP26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 IL10RBQ08334 325 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 CBLBQ13191 982 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 HNRNPDQ14103 355 aaKnown RBP26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 FNBP1LQ5T0N5 605 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 RNF43Q68DV7 783 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 GPR149Q86SP6 731 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 ARID3BQ8IVW6 561 aaPredicted RBP26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 MCUQ8NE86 351 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 USP33Q8TEY7 942 aa26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 UBLCP1Q8WVY7 318 aaPredicted RBP26.58■■□□□ 1.85
SCAMP4-210ENST00000588555 E7ESA3 106 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 CACNG3O60359 315 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 NFKB1P19838 968 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 ANO4Q32M45 955 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 MSS51Q4VC12 460 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 ITPRIPL1Q6GPH6 555 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 SYCE2Q6PIF2 218 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 CEP128Q6ZU80 1094 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 OR7D4Q8NG98 312 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 SP110Q9HB58 689 aa26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 EIF2B3Q9NR50 452 aaKnown RBP26.57■■□□□ 1.84
SCAMP4-210ENST00000588555 PRAMEF11O60813 436 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 RHOCP08134 193 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 WEE1P30291 646 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 ARL4CP56559 192 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 MPP7Q5T2T1 576 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 ANKRD54Q6NXT1 300 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 ZNF534Q76KX8 674 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 TRMT10CQ7L0Y3 403 aaKnown RBP26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 SERPINB12Q96P63 405 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 PDFQ9HBH1 243 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 RSPH14Q9UHP6 348 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 CDH22Q9UJ99 828 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 C5orf42Q9H799 3197 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 TYW5A2RUC4 315 aaKnown RBP26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 LUC7L3O95232 432 aaKnown RBP26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 CDK16Q00536 496 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 FSCBQ5H9T9 825 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 CFAP58Q5T655 872 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 ALS2CLQ60I27 953 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 CENPUQ71F23 418 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 CAND1Q86VP6 1230 aaKnown RBP26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 KLHDC8BQ8IXV7 354 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 TEX26Q8N6G2 289 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 ZIM3Q96PE6 472 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 APOL5Q9BWW9 433 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 FRMD8Q9BZ67 464 aaPredicted RBP26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 SAYSD1Q9NPB0 183 aa26.56■■□□□ 1.84
SCAMP4-210ENST00000588555 PRRC2BQ5JSZ5 2229 aaKnown RBP26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 E7EVH7 732 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 AGPSO00116 658 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 RIPK2O43353 540 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 HLA-DQB2P05538 268 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 MAGEA4P43358 317 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 TNK2Q07912 1038 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 FASTKD3Q14CZ7 662 aaKnown RBP26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 MPPE1Q53F39 396 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 PPP1R21Q6ZMI0 780 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 ZNF783Q6ZMS7 281 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 ZNF354CQ86Y25 554 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 NPAS3Q8IXF0 933 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 CARNMT1Q8N4J0 409 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 PDCD7Q8N8D1 485 aaKnown RBP26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 WFDC5Q8TCV5 224 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 ACE2Q9BYF1 805 aaPredicted RBP26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 RBM22Q9NW64 420 aaKnown RBP eCLIP26.55■■□□□ 1.843e-6■■■■■ 29.5
SCAMP4-210ENST00000588555 NFS1Q9Y697 457 aa26.55■■□□□ 1.84
SCAMP4-210ENST00000588555 GOLGA6BA6NDN3 693 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 ALOX15BO15296 676 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 EIF3HO15372 352 aaKnown RBP eCLIP26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 BANF1O75531 89 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 MAGEA3P43357 314 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 RENBPP51606 427 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 SLC10A7Q0GE19 358 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 LRIT3Q3SXY7 679 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 OTOP3Q7RTS5 596 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 MTERF4Q7Z6M4 381 aaKnown RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms