RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 PRPF4O43172 522 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 IRAK2O43187 625 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 MBL2P11226 248 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 NMBRP28336 390 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 PGM1P36871 562 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 SEMA5AQ13591 1074 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 PDCD2Q16342 344 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 CDHR3Q6ZTQ4 885 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 TAS2R42Q7RTR8 314 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 DENND1CQ8IV53 801 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC41A1Q8IVJ1 513 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 SUSD3Q96L08 255 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 RCOR3Q9P2K3 495 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 CRYL1Q9Y2S2 319 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 MTO1Q9Y2Z2 717 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.385e-6■■■■■ 148.7
SMARCA4-208ENST00000585799 A0A1W2PQ45 241 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 A0A1W2PQY0 241 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 BHMG1C9JSJ3 638 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 E9PBE3 544 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 KLHL41O60662 606 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 FKTNO75072 461 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 SKAP2O75563 359 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC8A1P32418 973 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 ADAM17P78536 824 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 SPANXN3Q5MJ09 141 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 FUT10Q6P4F1 479 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 TMCO2Q7Z6W1 182 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 ALYREFQ86V81 257 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 ARHGAP18Q8N392 663 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 PPFIBP2Q8ND30 876 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 GPR62Q9BZJ7 368 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 TMEM39AQ9NV64 488 aa12.68□□□□□ -0.38
SMARCA4-208ENST00000585799 ZNFX1Q9P2E3 1918 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 CKMP06732 381 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 ALADP13716 330 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 SERPINB8P50452 374 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 WNT3AP56704 352 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 WASHC5Q12768 1159 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 BTG3Q14201 252 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 RPS6KA2Q15349 733 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 CARNMT1Q8N4J0 409 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 TTC1Q99614 292 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 TRPM5Q9NZQ8 1165 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 STARD13Q9Y3M8 1113 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 GABRDO14764 452 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 PSMD3O43242 534 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC11A2P49281 568 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 CLNS1AP54105 237 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 NCALDP61601 193 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC12A1Q13621 1099 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 MUM1Q2TAK8 710 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 KLC3Q6P597 504 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 CYP4V2Q6ZWL3 525 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 AUTS2Q8WXX7 1259 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 PHF21BQ96EK2 531 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 GLOD4Q9HC38 313 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 MAN1C1Q9NR34 630 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 SNX15Q9NRS6 342 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 DCDC2Q9UHG0 476 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 PCDHB8Q9UN66 801 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 ADAMTS4O75173 837 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 GCAP28676 217 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 RENBPP51606 427 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 ZNF177Q13360 481 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 CUL3Q13618 768 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 ZNF460Q14592 562 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 TIGD7Q6NT04 549 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 ESRP1Q6NXG1 681 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 TRIM67Q6ZTA4 783 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 NSL1Q96IY1 281 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 RSRC1Q96IZ7 334 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 SEMA3CQ99985 751 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 PLLPQ9Y342 182 aa12.67□□□□□ -0.38
SMARCA4-208ENST00000585799 A8MX80 341 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 H0Y626 953 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 H7C4K7 107 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 ATP5HO75947 161 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 AP2A1O95782 977 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 KRT16P08779 473 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC1A6P48664 564 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 DSC2Q02487 901 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 MAP7D1Q3KQU3 841 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 MMEL1Q495T6 779 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 HABP4Q5JVS0 413 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 TTC7BQ86TV6 843 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 C10orf107Q8IVU9 208 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 DENND6AQ8IWF6 608 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 KCTD4Q8WVF5 259 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 PLK2Q9NYY3 685 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 MEI4A8MW99 385 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 TIMM44O43615 452 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 STMN1P16949 149 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 NPY2RP49146 381 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 UGP2Q16851 508 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 YTHDF3Q7Z739 585 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 SLC9A7Q96T83 725 aa12.66□□□□□ -0.38
SMARCA4-208ENST00000585799 CINPQ9BW66 212 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms